Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17966g00001 ATGCCAATGACATCATATGTTTCTCATGTTTCAAAGAAACGGAACGTGAAAACCAACGTTCGGCTGATTCTGTTCCCGCTGATCCTATGCTCGCTGCTCTTCGTGATCCAACGCGTAATCAACACGCAATTAAATAAGGCAGCATTCAGATGCGGTTGCGTCTGTGCCAACGATAGAACGAAAGAATCGAAATGCCCGGACGAAGAGAAAGTGTGTGGGGTCCAGTATTCCGATTCCACTCAAGCTTCCATGTGTGCCATTCCCAATCCCCCCGTTTGGCCACCGCTCTTGCAACTTCCCAATCCCTCCAGCCGTGCCGTGCGTACCGCTTCTCTTCCCTTTTGGGATTTGCCCGATCCTTCCTGCCGGAGAACCGCCTCCTGTCCTCTTACTCTCCTCTTCACCGCACTTAATCACTCCTTTGCCCAAACCCTGTCTGCCAATTTGTTTGGGACTTCCTTCAGTATTACTGACTCTACTGATTTCTTGGCTATTTTGGCCCTCAATGCACTGGGATCTGATTCAACGCCCGGGAGAAGCTATTTTATTGAGAATGCTTTCTCTTCGGGTTTTCCCATTTATTATCTACAAACAAAGTGCATGGACACGGAGCACTCTGGACTGCCCTTTCCCTTGATGCCAGTAGCAGGCAATGAGATCAAATGTGCTCAAGCTCTAAATTTATGGCGTAATAGTTCTTCTGAGATCAACAGTGAGCTATATAAAGGTTATCAAAGAGGTAACGCAGAAGGACAAGTCAATGAGATAGTTTCAGCTTTTGATTTTCTAAATTCAAACGGGAATAGATATAATGTCAGTATATGGTACAACTCAACCTACAAGCAAGACACTGGATTTAGTCCTTCTATGTTGTTGCGGATTCCTCGCTCAGTAAATTTGATATCAAATTCCTACCTGCAGTTTCTGCTTGGACCTGGAACCAAAATGTTATTTGAGTTTGTAAAGGAAATGCCAAAGCCTGAAACCAGCCTTACCATTGAGATAGCTTCTCTTTTGGGCACTCTGTTCTTTACATGGGTCATCCTGCAGCTTTTTCCTGTTGTTCTGACATCACTAGTATATGAGAAGCAACAAAAATTAAGAATCATGATGAAAATGCATGGTCTTGGTGATGGGCCATATTGGATGATTTCATATGGTTATTTTCTTTCCATATCAGTAATCTACATGTTGTGTTTTGTGATATTTGGCTCACTCTTAGGATTAAAAATCTTCTCATCGAATGACTACAGCATCCAATTTGTGTTTTATTTCATCTATATAAACTTACAAATTGCACTGGCATTTTTGGTAGCTTCCATATTTTCAAATGTTAAGACTGCTACAGTAAGTGCATATATAGGTGTCTTTGGAACTGGGTTATTAGCTGGCTTTCTTTTCCAATTCTTTGTTGAAAATACATCATTTCCAAGAGGGTGGATCATTGTTATGGAGTTGTATCCTGGGTTTGCTTTATATCGTGGGATATACGAGTTAGCACAATTTTCCTTAGATGGGAGTACTGCAGGAACTGGTGGTATGCAATGGCAGGATTTGAATGAAAGCCCCAATGGCATGAAAGAGGTCTTAGTTATCATGTTTGTTGAGTGGATAGTAATGCTTTTTGCTGCCTTCTACATTGATCAAGTATTGTCGTCAGGAAGTAGAAGAAGTCCTCTTTTCTTCTTGAAAGGATTTCAGAAAAAGCCTCTTTTCCAGAGGATTGATACTCAGATGCAGGGATCAAAAGTATTCTCTCAGATGGAGAAACCTGATGTCATCCAAGAGAAGGAGAAGGTGGAGCAACTGCTACTCGAACCAACTATTAATCATGCAATTGTATGTGACGGCCTAAAAAAAGTCTATCCAGGGAGGGATGGAAATCCAGATAAATTTGCAGTGAGAGGGTTGTTCCTTTCTGTGCCTCAAGGGGAATGCTTTGGTATGCTTGGTCCCAATGGAGCTGGGAAGACCTCTTTTATCAATATGATGATTGGTCTCACAAAGCCAACCTCTGGTACTGCATTTGTTCAAGGCTTGGACATAATGACTCATATGGAAGGAATATATACTACCATGGGTGTATGCCCACAGCATGACTTGCTGTGGGAAAGCTTGACAGGTAGAGAGCACCTACTTTTTTATGGCAGACTTAAAAATCTTAAAGGTTCAGTCTTGACACAGGCAGTAGAAGAATCTTTGAAAAGTTTAAACCTTTTTCATGGAGGAGTTGCTGATAAACAAGCTGGAAAATACAGTGGAGGGATGAAGAGGAGGCTTAGTGTTGCAATTTCATTGATTGGGGATCCCAGAGTTGTTTACATGGATGAACCAAGTTCCGGGTTAGACCCTGCCTCAAGAAAAAGCTTATGGAATGTTGTCAAGCATGCAAAACAGGACCGTGCAATCATTCTCACCACACATTCCATGGAAGAGGCAGAGGCCTTATGTGATCGATTGGGAATATTTGTAAATGGTAGCTTGCAGTGTGTAGGAAATCCAAAGGAGCTGAAAGCAAGATATGGAGGAACTTACGTGTTCACAATGACAACATCTTCGGACCATGAAAAAGATGTGGAGAACATGGTGCAGAAACTCACCCCAAATGCTAACAAGATATACCATCTCTCTGGTACTCAGAAGTTTGAGCTGCCAAAAGAGGATGTTAGAATAGCGGATGTATTCCAAGCTGTTGACGCTGCAAAGAGAATCTTCACAGTTTCTGCATGGGGTTTAGTTGACACCACATTGGAAGATGTCTTCATTAAGGTAGCACGTCAGGCTCAGGCATTTGACACCTTGTCATAG 2808 0.422 MPMTSYVSHVSKKRNVKTNVRLILFPLILCSLLFVIQRVINTQLNKAAFRCGCVCANDRTKESKCPDEEKVCGVQYSDSTQASMCAIPNPPVWPPLLQLPNPSSRAVRTASLPFWDLPDPSCRRTASCPLTLLFTALNHSFAQTLSANLFGTSFSITDSTDFLAILALNALGSDSTPGRSYFIENAFSSGFPIYYLQTKCMDTEHSGLPFPLMPVAGNEIKCAQALNLWRNSSSEINSELYKGYQRGNAEGQVNEIVSAFDFLNSNGNRYNVSIWYNSTYKQDTGFSPSMLLRIPRSVNLISNSYLQFLLGPGTKMLFEFVKEMPKPETSLTIEIASLLGTLFFTWVILQLFPVVLTSLVYEKQQKLRIMMKMHGLGDGPYWMISYGYFLSISVIYMLCFVIFGSLLGLKIFSSNDYSIQFVFYFIYINLQIALAFLVASIFSNVKTATVSAYIGVFGTGLLAGFLFQFFVENTSFPRGWIIVMELYPGFALYRGIYELAQFSLDGSTAGTGGMQWQDLNESPNGMKEVLVIMFVEWIVMLFAAFYIDQVLSSGSRRSPLFFLKGFQKKPLFQRIDTQMQGSKVFSQMEKPDVIQEKEKVEQLLLEPTINHAIVCDGLKKVYPGRDGNPDKFAVRGLFLSVPQGECFGMLGPNGAGKTSFINMMIGLTKPTSGTAFVQGLDIMTHMEGIYTTMGVCPQHDLLWESLTGREHLLFYGRLKNLKGSVLTQAVEESLKSLNLFHGGVADKQAGKYSGGMKRRLSVAISLIGDPRVVYMDEPSSGLDPASRKSLWNVVKHAKQDRAIILTTHSMEEAEALCDRLGIFVNGSLQCVGNPKELKARYGGTYVFTMTTSSDHEKDVENMVQKLTPNANKIYHLSGTQKFELPKEDVRIADVFQAVDAAKRIFTVSAWGLVDTTLEDVFIKVARQAQAFDTLS 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17966g00001 935 CDD ABC_subfamily_A 617 838 - -
Mupr17966g00001 935 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 613 850 IPR003439 GO:0005524
Mupr17966g00001 935 Pfam ABC transporter 638 779 IPR003439 GO:0005524
Mupr17966g00001 935 SMART AAA_5 643 827 IPR003593 GO:0016887
Mupr17966g00001 935 FunFam ABC transporter A family member 7 602 878 - -
Mupr17966g00001 935 ProSitePatterns ABC transporters family signature. 752 766 IPR017871 GO:0005524|GO:0016887
Mupr17966g00001 935 Gene3D - 605 880 IPR027417 -
Mupr17966g00001 935 Pfam ABC-2 family transporter protein 266 546 IPR013525 GO:0016020|GO:0140359
Mupr17966g00001 935 Coils Coil 931 935 - -
Mupr17966g00001 935 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 613 846 IPR027417 -
Mupr17966g00001 935 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 584 930 IPR026082 GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17966g00001 Mupr-Chr17966 3777 13864 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17966g00001 622 861 Calmodulin-binding Proteins AT2G36910 23.887 7.70e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17966g00001 - - gmx:100792897 1602.8