Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17965g00001 ATGTCACAAGTACTCACCACATGTGCACCACCTCAATATGTATCGCTTCGCCGGGTCGGAATTTCGAAGCCATCGAAGTGGGTCACAAAATGTGCTACCATTTCTTCACTATCGATTTCTGCCTCTGCTCCTCTTCGCAACGCGTCGTTTTGCTGCACCTCTTCTGTCCAATGCAATTTGCCTTCTTCACCCAAAATCTTCGTCAAAGGGCTTCCTCTCTCAACCTCTGAAGGACGTTTGGTGAAGGTGTTTTCAGAATTTGGTGAAGTTACTCTAGTCCAGCTTCCAATAGATAAAGAATCTGGGCAGTCTTTAGGATTTGCATATATTTGGTTTGTCAAGGAAGAGTCTGCCCAATTGGCTGTGCAGGAGATGAATGGAAAGGTTTATTTATGTTACAATTGCAAAGCCTGGATCATCAAAAAGTTCGAAGACAACAACAGCCTACAAATTTTACTCAAGTCCCTCATGGGGAAAGTGCAAGGCTTTAGCCTTCTATGTTTTGGTGGCTGCTTTGATAGCTGTCCTGACCACACTCAAGGCTCTGGATATGGGACAAGGATATGGAACCTCAGGGATTGGCTAGTGGAGCTACAAATAAGGGTGGGATCAGTACTGAAGAAGATTTGTATGTTGAAGCTGGGGTCTTTCAAAAGACTGAAATTTGGTGGGAGCTTGAAGAGCTTATTGTATTACTATGATGAATATTTGGGTTGTCATTCCTTAAGGATGGTTAAGCAGCAGTATATTAGACTCGAGGATCTGAGGGATTCTTCTGAGATGAAAATCTTCTGGGATCATCAGAGAGGATGCAACTGCTAA 822 0.4343 MSQVLTTCAPPQYVSLRRVGISKPSKWVTKCATISSLSISASAPLRNASFCCTSSVQCNLPSSPKIFVKGLPLSTSEGRLVKVFSEFGEVTLVQLPIDKESGQSLGFAYIWFVKEESAQLAVQEMNGKVYLCYNCKAWIIKKFEDNNSLQILLKSLMGKVQGFSLLCFGGCFDSCPDHTQGSGYGTRIWNLRDWLVELQIRVGSVLKKICMLKLGSFKRLKFGGSLKSLLYYYDEYLGCHSLRMVKQQYIRLEDLRDSSEMKIFWDHQRGCNC 273
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mupr17965g00001 273 Gene3D - 48 136 IPR012677 -
Mupr17965g00001 273 PANTHER RNA-BINDING MOTIF PROTEIN, X-LINKED 2 53 128 - -
Mupr17965g00001 273 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 66 130 IPR000504 GO:0003723
Mupr17965g00001 273 SUPERFAMILY RNA-binding domain, RBD 60 131 IPR035979 GO:0003676
Mupr17965g00001 273 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 64 145 IPR000504 GO:0003723
Mupr17965g00001 273 SMART rrm1_1 65 140 IPR000504 GO:0003723
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mupr17965g00001 Mupr-Chr17965 7659 9968 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17965g00001 66 130 Eukaryotic Initiation Factors Gene Family AT3G11400 40.000 1.33e-08 53.1