Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17955g00001 TTAGGTCTTAAACGTACGGGAAAGAGTTGTCGACTCCGTTGGCTAAACTACCTTCGTCCTGATGTTAGAAGAGGAAATATTACACCCGAGGAACAGCTTTTGATCATAGAACTTCATGCAAAGTGGGGTAATAGGTGGTCCAAAATTGCAAAGCATCTTCCGGGAAGAACCGACAATGAGATCAAGAACTTCTGGAGAACTAGGATCCAGAAGCACATTAAGCAAGCTGAGAATTTACAACAACAGGGTAATTCAGAGATAAATTTAAATGATCATCATCAAGCAAGCACCAGCACTAGCAAAGTGTCCATCATGGCACAGCCCATTGAGAGTTACTCTCCACCCTCATACCAACAAGGAACTTTGGATCCATTTCCAACTCAGCTCCCTACAATCACTGATCATCAGTCAAGTTGCTGTACCAATGCCAACAACTATTGGAGCATGGAGGATATCTGGTCCATGCAATTACTCAATGGGGAT 483 0.4306 LGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIIELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKHIKQAENLQQQGNSEINLNDHHQASTSTSKVSIMAQPIESYSPPSYQQGTLDPFPTQLPTITDHQSSCCTNANNYWSMEDIWSMQLLNGD 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17955g00001 161 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Mupr17955g00001 161 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Mupr17955g00001 161 CDD SANT 28 67 IPR001005 -
Mupr17955g00001 161 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 18 IPR017930 -
Mupr17955g00001 161 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Mupr17955g00001 161 SUPERFAMILY Homeodomain-like 4 75 IPR009057 -
Mupr17955g00001 161 Gene3D - 2 23 - -
Mupr17955g00001 161 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 2 102 IPR044676 GO:0003700|GO:0006355|GO:0043565
Mupr17955g00001 161 SMART sant 23 71 IPR001005 -
Mupr17955g00001 161 FunFam Myb-related protein 305 28 100 - -
Mupr17955g00001 161 Gene3D - 28 101 - -
Mupr17955g00001 161 Coils Coil 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17955g00001 Mupr-Chr17955 100 3488 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17955g00001 1 161 MYB Transcription Factor Family AT3G27810 55.435 3.43e-61 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr17955g00001 Myb_DNA-binding 2.6e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17955g00001 K09422 - gmx:100816972 272.322