Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17949g00001 ATGGTGATAAATAACGTTACCCTGCACCGCATTTCTTCCCTTTCTCCCTCCTCTCCTCCTCACCCCCTAATAGCCAAAAACCCTGTCACTCTGTCTCCAACCATGCTCACCACCCTCCCTCCCTCCGATCCCCTCATCGGAAACCCATTCTCCGCCTTCACCGGCGTTTTCACGCCCTGGGAGGATTCCGACGACCTATTCTCCCCCAAACCTGTCACTTCCAGCTCCGGTTCTGACGAGGCCAACCAAAACCCCGCAAAACCCGAACCGGCGTCGGTGATGGACGAGCGGAAACGGCGCCGCATGATCTCGAACCGGGAATCGGCCCGCAGGTCGCGGATGCGTAAACAGAGACACCTCGAGAACCTTCGGAACCAGTTGAACAAGTTCAGGATCGAAAACCGGGAACTGAATAACCGGTTGCAGTTCGTCCTGCACCACTGTAACCGCGTGCGAACCGAAAACGAATGGCTCCGGTCCGAGCAAACCCTGCTCCGCCAAAAAGTCAACAACTTAACTCAAATTTTGATTTTCCAACGATTTCAACCCTTCTCCCCTGCATGGACATGCAATACTTCGCTCATGACAATTAATCAAGTTAATTAA 606 0.533 MVINNVTLHRISSLSPSSPPHPLIAKNPVTLSPTMLTTLPPSDPLIGNPFSAFTGVFTPWEDSDDLFSPKPVTSSSGSDEANQNPAKPEPASVMDERKRRRMISNRESARRSRMRKQRHLENLRNQLNKFRIENRELNNRLQFVLHHCNRVRTENEWLRSEQTLLRQKVNNLTQILIFQRFQPFSPAWTCNTSLMTINQVN 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17949g00001 201 CDD bZIP_plant_GBF1 98 149 IPR045314 GO:0003700|GO:0006355
Mupr17949g00001 201 PANTHER BZIP TRANSCRIPTION FACTOR 44 68 179 - -
Mupr17949g00001 201 Gene3D - 95 148 - -
Mupr17949g00001 201 MobiDBLite consensus disorder prediction 64 116 - -
Mupr17949g00001 201 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 95 158 IPR004827 GO:0003700|GO:0006355
Mupr17949g00001 201 SUPERFAMILY Leucine zipper domain 97 147 IPR046347 GO:0003700|GO:0006355
Mupr17949g00001 201 Coils Coil 106 140 - -
Mupr17949g00001 201 MobiDBLite consensus disorder prediction 68 85 - -
Mupr17949g00001 201 FunFam BZIP transcription factor 95 146 - -
Mupr17949g00001 201 MobiDBLite consensus disorder prediction 91 110 - -
Mupr17949g00001 201 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 100 115 IPR004827 GO:0003700|GO:0006355
Mupr17949g00001 201 SMART brlzneu 93 157 IPR004827 GO:0003700|GO:0006355
Mupr17949g00001 201 Pfam bZIP transcription factor 97 155 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17949g00001 Mupr-Chr17949 2543 3148 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17949g00001 35 180 bZIP Transcription Factor Family AT3G49760 42.675 1.94e-34 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mupr17949g00001 bZIP_1 3.1e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17949g00001 - - gmx:100809244 239.58