Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17947g00002 ATGGTTGTTTACAAGAATAAAAAGTTGCAGATTGTTGAATGCAATGTATTGCCCACTCTTGTACCAATGCTTCAATCAAAGGATCCTACAATACATTATGAGGCGGTTGGTTCGATTGGAGTTATGGTCCACTCTTCACCAAATATTAAGAAAGACATTCTTCTAGCCGGGGCTTTACAACCTGTTTTTGTTTACTTAGTTCCTGCTGTTCTGAGAGCCAAAGAGAAGCAGCCCTTTTACTTGATTCATATTGCCCAAAGAGGGCCTATTCCACCATTGCTTGATATGCTTAAGTCTCCAGATGCAAGGCTTCAGGAAATGTCAGCTTTTGCACTTGGGAGGTTGGCACAGGATTCACATAATCAAGCTGGTATTACTAGTAACAGAGGTGTAGAGCCTCTGCTCAATCTTCTTATCTCAAATAATGCGCTCCTCCAATGCAATGCTGCTTTTGTTTTCTATTATCTTGCTGATAATGAGGACAATGTTGCTGACATTATTAAGGCTGGTGGTTTTCAAAGACTGAAGGCTGGATGTTTCGAAAATGAACAAGCTAGAGAGTGTGCAGCAAAGGCGTTAGAGAGATTAGAGGAAAAGATGCAAGGGCGAGTATTGAAACACCTAATATATCTCATGTGCTTTGCAGAAGAAGGGGTTCAAAGACATGTAGCTATTGCTCTTGCTTATTTATGTTCTCCTCATGATCATAAAACTATATTCATTGACAATAATGGATTAGAATTGCTGATGGGTCTTCTTGAATCTCCAGATGTAAAGCAGAAGCAGAAGGGCGATGCTTCAGCGGCACTTTACCATTTGGCTGTGAAAGCCAGTTCTTTTGTCTCTCTTATTGGTGATGGAGATGCTGCTCCTCCATCACCAATTCCCCAGATGTACTTCGGCGAGGAGGAGTATGTAAACAATCCTATGTTTTCTGATGTCACATTGCTGGTTGAAGGTGAAGCATCTACTGCTATTATTTTTGGTAGAATTTTTTATGCACATAGATATTGTTTGCTTTCGTCAGATATATTTCGCACAATGTTTGATGGCAGAATAGGAAGCAAAGATATAGTGATTACAAATATTAAATGGGATGTTTTTGAATTGATGATGAGATATATATACACTGGATCAGTAGATGTCAATTTGGACCTTGCTCATGACCTCCTCAGAGCTGCAGATCAGTACCTTCTGGAGGGCCTTAAGCGTATTTGTGAAAATGCTATTGTTCAGGATATTTCTGTGGAAAATGTTTCACTAATGTACTAG 1272 0.3962 MVVYKNKKLQIVECNVLPTLVPMLQSKDPTIHYEAVGSIGVMVHSSPNIKKDILLAGALQPVFVYLVPAVLRAKEKQPFYLIHIAQRGPIPPLLDMLKSPDARLQEMSAFALGRLAQDSHNQAGITSNRGVEPLLNLLISNNALLQCNAAFVFYYLADNEDNVADIIKAGGFQRLKAGCFENEQARECAAKALERLEEKMQGRVLKHLIYLMCFAEEGVQRHVAIALAYLCSPHDHKTIFIDNNGLELLMGLLESPDVKQKQKGDASAALYHLAVKASSFVSLIGDGDAAPPSPIPQMYFGEEEYVNNPMFSDVTLLVEGEASTAIIFGRIFYAHRYCLLSSDIFRTMFDGRIGSKDIVITNIKWDVFELMMRYIYTGSVDVNLDLAHDLLRAADQYLLEGLKRICENAIVQDISVENVSLMY 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17947g00002 423 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 6 423 IPR044282 -
Mupr17947g00002 423 SMART BTB_4 312 414 IPR000210 GO:0005515
Mupr17947g00002 423 ProSiteProfiles BTB domain profile. 312 384 IPR000210 GO:0005515
Mupr17947g00002 423 SUPERFAMILY POZ domain 294 413 IPR011333 -
Mupr17947g00002 423 Pfam BTB/POZ domain 305 412 IPR000210 GO:0005515
Mupr17947g00002 423 Gene3D Potassium Channel Kv1.1; Chain A 296 423 IPR011333 -
Mupr17947g00002 423 SMART arm_5 159 198 IPR000225 GO:0005515
Mupr17947g00002 423 SMART arm_5 4 44 IPR000225 GO:0005515
Mupr17947g00002 423 SMART arm_5 118 158 IPR000225 GO:0005515
Mupr17947g00002 423 SMART arm_5 233 275 IPR000225 GO:0005515
Mupr17947g00002 423 SMART arm_5 76 117 IPR000225 GO:0005515
Mupr17947g00002 423 Gene3D - 2 290 IPR011989 -
Mupr17947g00002 423 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 88 130 IPR000225 GO:0005515
Mupr17947g00002 423 Pfam Armadillo/beta-catenin-like repeat 8 40 IPR000225 GO:0005515
Mupr17947g00002 423 SUPERFAMILY ARM repeat 8 273 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17947g00002 Mupr-Chr17947 1636 4636 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17947g00002 82 175 U-box Gene Family AT5G40140 32.979 7.73e-09 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mupr17947g00002 BTB 3.3e-18 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17947g00002 - - gmx:100783124 503.827