Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17946g00001 ATGGAGTTGATGCAAGAAGTGAAAGGGTATTCTGATAGCAGAGAGGAGGAGGAGGAAGAGGAGGCAGCAGAAGAAATCATCACAAGAGAAGAAAGCAGCAGTAAGCACCACTACCCCTTTTCTTCTCCCTCTTTGTCTTTATCTTCTGCTCCTTCAATATCAAATTATACTAGTACTACTGCTGCAACACGTCCTCATCACCATCATCATCATGAAATAAATATTCCTCACCAACAAAATCCATGGCTGGGGATGAATATTCATGATCATCATCATCATCATCAGTCTCCAGAGACCACTGAATCTCACAATTCATCATCTGGGTTAGGGTTGTTACACCAGCACCAGGATGCAGCAGCTTCCAATCATCACCAGCAGCAGCTAGACTTCATGGACTTGTCACTGGGGAGCACCAAGGATGAAGGGAATTTGCAAGGATCAGCAGGAGGTGCTTCTTCTTCTGCTGTTTATGGTCATGCAAGTGGTCCTTCTTCTGCCAATGGTAACCAGCCTGCTGAGAAGGAGCACATGTTTGATAAAGTTGTGACACCGAGTGATGTGGGGAAGCTGAACCGGTTGGTGATACCAAAGCAGCATGCTGAGAAGTATTTCCCTCTTGATTCCACAGCCAATGAGAAGGGGCTGTTGCTCAATTTTGAGGACAGGAATGGAAAGTTGTGGAGGTTCAGATACTCCTATTGGAACAGCAGCCAGAGCTATGTGATGACCAAGGGGTGGAGCCGTTTTGTGAAGGAGAAGAAGCTTGATGCTGGTGACATTGTGTCCTTCCAGCGTGGTGTTGGGGAATTGTATAGGCATAGGTTGTACATAGATTGGAGGAGAAGGCCTGATCACCACCACCATCATGGCCCTGACCCTTCAACCACACTCTTCACACCTTTCTTTCTTCCCAATCAGCCACACTTAATGTCCATCAGATGGGGTGCCACTGGCAGATTCTACTCCCTTCCCTCTCCAACCCCACCACGCCACCATGACCATTTGCAACAACAACACCTCAATTACAGCACCATGTATCATCAACAACAACAACATCCTTTTCATCACCATGGTAGTGGAAGTGGAAATGGAACTCATCACTACAATAACTATCATGAGATGAGTTCAGGATCTGGCTCAGTCTTTTACCTCAGGTCAACACCCCCATCAATGCCATTGGCTGATCATCAAACCTTGAGCACAAGGCAACAACAACAGCAACAAGAGGGAGGCAATAATGCTTCCCTTTCCCCTATGATCATTGATTCTGTTCCGGTTGCTCACCACCATCATCACCACCATGGTGGCAAGAGTGGTTCTACTACTAGTAGTACTAGTCCTAGCACTGCAGGCAAAAGACTAAGGCTATTTGGGGTGAACATGGAATGTGCTTCTTCAGCAACAGAAGACCCCAGATGTTTCAGCTTATTGTCCTCATCTTCGGTGGCTAATTCCAATTCACTTCCCTCTTCTTCACTACCACCTCTTCAGCGTTTGAGGGAAGACTCACTTTCATCACCATCAGCAAGGTTTGGGGATCACAGAGGAGAGGAACCTTCAATGCTTTTTGATCTGGACCCTTCTTTGCAATACCGCCAGTGA 1602 0.4663 MELMQEVKGYSDSREEEEEEEAAEEIITREESSSKHHYPFSSPSLSLSSAPSISNYTSTTAATRPHHHHHHEINIPHQQNPWLGMNIHDHHHHHQSPETTESHNSSSGLGLLHQHQDAAASNHHQQQLDFMDLSLGSTKDEGNLQGSAGGASSSAVYGHASGPSSANGNQPAEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSTANEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGELYRHRLYIDWRRRPDHHHHHGPDPSTTLFTPFFLPNQPHLMSIRWGATGRFYSLPSPTPPRHHDHLQQQHLNYSTMYHQQQQHPFHHHGSGSGNGTHHYNNYHEMSSGSGSVFYLRSTPPSMPLADHQTLSTRQQQQQQEGGNNASLSPMIIDSVPVAHHHHHHHGGKSGSTTSSTSPSTAGKRLRLFGVNMECASSATEDPRCFSLLSSSSVANSNSLPSSSLPPLQRLREDSLSSPSARFGDHRGEEPSMLFDLDPSLQYRQ 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17946g00001 533 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 13 475 IPR044800 GO:0003700
Mupr17946g00001 533 SUPERFAMILY DNA-binding pseudobarrel domain 174 279 IPR015300 -
Mupr17946g00001 533 SMART B3_2 178 283 IPR003340 GO:0003677
Mupr17946g00001 533 MobiDBLite consensus disorder prediction 507 521 - -
Mupr17946g00001 533 Gene3D - 172 290 IPR015300 -
Mupr17946g00001 533 ProSiteProfiles B3 DNA-binding domain profile. 178 283 IPR003340 GO:0003677
Mupr17946g00001 533 MobiDBLite consensus disorder prediction 481 533 - -
Mupr17946g00001 533 MobiDBLite consensus disorder prediction 1 110 - -
Mupr17946g00001 533 MobiDBLite consensus disorder prediction 347 419 - -
Mupr17946g00001 533 MobiDBLite consensus disorder prediction 139 171 - -
Mupr17946g00001 533 CDD B3_DNA 176 265 IPR003340 GO:0003677
Mupr17946g00001 533 MobiDBLite consensus disorder prediction 139 172 - -
Mupr17946g00001 533 MobiDBLite consensus disorder prediction 481 504 - -
Mupr17946g00001 533 MobiDBLite consensus disorder prediction 37 62 - -
Mupr17946g00001 533 Pfam B3 DNA binding domain 178 282 IPR003340 GO:0003677
Mupr17946g00001 533 FunFam B3 domain-containing protein 171 291 - -
Mupr17946g00001 533 MobiDBLite consensus disorder prediction 347 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17946g00001 Mupr-Chr17946 3892 5493 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17946g00001 170 467 RAV Transcription Factor Family AT2G46870 50.000 1.26e-81 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mupr17946g00001 B3 3.9e-28 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17946g00001 K09287 - gmx:100781424 654.825