Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1793g00002 ATGGATTTGGACGATTTCCGATCCATATTGGACACCGCGGGCGTCGACGTCTGGATGTTTATCGACGCAGCAATCGCCGTCGCGTCCGCGGACTGTGCCGCCGAGTTGAAGCGCCGCCGCGACGCAATCGTGGAACGCCTCTACGCCGCCTCGGCGCCGCCTCCGCGCTGCCGGAATTGCGATGATGGCGACCGCCTCAGGCCCAACGGCCACCAAATCAAGAAACAGAGCAGTCCTAGCCCCAGCCCCGAGCGGCAGCCGCTCCAACGCCGCGGCGACGCCGCTTCCCCCGCCACGCCGCAGTCTCTCGACGACGGCAACGCCGACGCAGACGACGCCGGCGAGGACGTAGATCCTTACGGCGGCTTGTTCGACGACGAACAGAAGAAGATTCTAGAGATTAAAGAGCAACTCGAAGATCCTAACCAGTCTGAGGATTCTTTGGTGGAGTTGCTGCAAAGTCTCGCGGACATGGATATTACATTCCAAGCGTTAAAGGACACTGACATCGGGAGACACGTGAATCGGTTACGGAAGCATCCTTCAAACGACGTTCGGCGATTGGTGAAGCTGCTTGTCAGGAAGTGGAAGGAGATTGTGGATGAGTGGGTGAAGTTGAAACCACAAGGAGAGGGAGGAGGCAACACTCTGATGGCTGATGGAGACTCGCCTGTGCAGAAAACCACCCAAAATGGGCATCATCAGCAGGTTGAGATTCCTGATTTTGCATACTCGCCAAATCCACACAACGGCAGCTCTGGCTCTGACCGTAACACCTCAGAAGCAGAACACAAACCCAAAGTAATTCCGCGCAGCGAACCTCGGCCAAAACCCGCGCCATCACCGTCACTTTCCACCCCTGCTTCCGCCACCCAAAATAGACAGAGAGAGAGCAGTTTTGACGCGGAGAGGCTTGCTTCGGCGAGAAGGCGGCTTCAGGAGAACTACAAAGAGGCTGAAAATGCCAAAAGGCAAAGAACGATTCAGGTGATGGACATCCACGAGTTACCAAAGTCAAAACCCAAGAATAATGTCTTCTTTGGGAAGAACAAAGGTGGCGGTGGTTCTCAGGGAAGGCACTGGGTACCCAACAAACCCGCGTTTGTCCGTTTGTTGAGGGAGGAGCACGTGATTTCGGAAAACAAGATAGAGATGGGACGGAGAGAAACAGCAAAGGGAAGTCAAGAAGTGGTCATACTCGATGATTTCGCTCCGGGTGGGTGGGGAATTTGTTGCTGTGGGAATCAATAA 1251 0.5508 MDLDDFRSILDTAGVDVWMFIDAAIAVASADCAAELKRRRDAIVERLYAASAPPPRCRNCDDGDRLRPNGHQIKKQSSPSPSPERQPLQRRGDAASPATPQSLDDGNADADDAGEDVDPYGGLFDDEQKKILEIKEQLEDPNQSEDSLVELLQSLADMDITFQALKDTDIGRHVNRLRKHPSNDVRRLVKLLVRKWKEIVDEWVKLKPQGEGGGNTLMADGDSPVQKTTQNGHHQQVEIPDFAYSPNPHNGSSGSDRNTSEAEHKPKVIPRSEPRPKPAPSPSLSTPASATQNRQRESSFDAERLASARRRLQENYKEAENAKRQRTIQVMDIHELPKSKPKNNVFFGKNKGGGGSQGRHWVPNKPAFVRLLREEHVISENKIEMGRRETAKGSQEVVILDDFAPGGWGICCCGNQ 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1793g00002 416 ProSiteProfiles TFIIS N-terminal domain profile. 126 203 IPR017923 -
Mupr1793g00002 416 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 128 214 IPR035441 -
Mupr1793g00002 416 Pfam TFIIS helical bundle-like domain 151 200 IPR017923 -
Mupr1793g00002 416 MobiDBLite consensus disorder prediction 52 122 - -
Mupr1793g00002 416 CDD TFIIS_I 128 201 - -
Mupr1793g00002 416 MobiDBLite consensus disorder prediction 258 272 - -
Mupr1793g00002 416 MobiDBLite consensus disorder prediction 221 236 - -
Mupr1793g00002 416 MobiDBLite consensus disorder prediction 207 302 - -
Mupr1793g00002 416 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 361 IPR044790 -
Mupr1793g00002 416 SMART TFS2_5 131 202 IPR003617 GO:0005634
Mupr1793g00002 416 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 125 212 IPR035441 -
Mupr1793g00002 416 Coils Coil 302 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1793g00002 Mupr-Chr1793 19591 21933 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Mupr1793g00002 Med26 9.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1793g00002 - - gmx:100804034 556.599