Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17939g00001 ATGGGAACACCTGAAGATGGAGCAGAAAGCTTCTTCTGTGCCCTTCAGATAGTGAATTCTGTTTCGCTGCCCTTGTCCTTGCACGCTGTTTTGGACCTCGGCGTCTTCGATATAATCCATAAAGCAGGCCCAGATGCCAGGGTCTCGGCCCAGGACATTGCGGCCCAGTTTTCCAGCAACAACCCGGATGCACCCACTATGCTAGATAGGATCCTCATGCTCCTTGCTAGTCACTCTCTCCTTCATTGTTCTCTTTCTCATGATCAATTTGGTTCTTTCAAGAGACTATACAGTCTCAATTCTGTGTCCAGATATTTCATACCCAATCAAGATGGGTTCTCGTTGAAGCCTCTCGTGGCATTGATTCATGACAAAGTCTTTTTACAAAGCTGGTTAGTGTCTGAATTGAAAGAGGCGATTTTGGAAGGGGGTATACCCTTCAATAGAGTTCATGGCATGCATGCGTTTGAGTATCCTAGCTCCGACCCCAGGTTCAATCAAGTTTTTAATGCAGCAATGAGCAGCAGCACGCATTTGTCAGCAAAGAGGATTCTTGAATCCTACAAAGGCTTTGAGCACATCAATAAGTTAGTGGATGTTGGAGGTGGTTTTGGGACTAACCTTAATTACATTATCTCCAAATACCCTAATATTCAGGGCATTAATTTCGATTTGCCTCACGTCATAAAAGAAGCCCCTTCATATCCTGGTGTGAAGCATGAGGGAGGGGATATGTTTGAGAGTGTTCCACACGGAGACGCTATTTTTATGAAGTTTATACTGCATGATTGGAATGATGAACGATGCTTGAAGCTGTTGAAGAACTGCTACAATGCTATTCCTGATGATGGGAAGGTAATTGTGGTGGAACAAGTACTTCCCACAACACCTGAAACAAGTACTTTGGTGAAAATCGCATGTCAAACTGATGTTCTTATGATGACTCAGAATCCAGGAGGTAAGGAGCGAAACGAACAAGAATTTAAGGAACTAGCAAAAGCATCAGGATTTAAGGACATTAGATATGATTGTTTTGCTTATGACCTAAGGGTTATGGAGTTCTTCAAGTAG 1071 0.4314 MGTPEDGAESFFCALQIVNSVSLPLSLHAVLDLGVFDIIHKAGPDARVSAQDIAAQFSSNNPDAPTMLDRILMLLASHSLLHCSLSHDQFGSFKRLYSLNSVSRYFIPNQDGFSLKPLVALIHDKVFLQSWLVSELKEAILEGGIPFNRVHGMHAFEYPSSDPRFNQVFNAAMSSSTHLSAKRILESYKGFEHINKLVDVGGGFGTNLNYIISKYPNIQGINFDLPHVIKEAPSYPGVKHEGGDMFESVPHGDAIFMKFILHDWNDERCLKLLKNCYNAIPDDGKVIVVEQVLPTTPETSTLVKIACQTDVLMMTQNPGGKERNEQEFKELAKASGFKDIRYDCFAYDLRVMEFFK 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17939g00001 356 Pfam O-methyltransferase domain 134 338 IPR001077 GO:0008171
Mupr17939g00001 356 PIRSF O-mtase 4 356 IPR016461 GO:0008168
Mupr17939g00001 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 15 356 IPR016461 GO:0008168
Mupr17939g00001 356 Gene3D Vaccinia Virus protein VP39 108 356 IPR029063 -
Mupr17939g00001 356 Gene3D - 2 106 IPR036388 -
Mupr17939g00001 356 FunFam Caffeic acid 3-O-methyltransferase 3 106 - -
Mupr17939g00001 356 PANTHER O-METHYLTRANSFERASE 17 341 IPR016461 GO:0008168
Mupr17939g00001 356 FunFam Caffeic acid O-methyltransferase 107 356 - -
Mupr17939g00001 356 Pfam Dimerisation domain 26 76 IPR012967 GO:0046983
Mupr17939g00001 356 SUPERFAMILY "Winged helix" DNA-binding domain 8 109 IPR036390 -
Mupr17939g00001 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 353 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17939g00001 Mupr-Chr17939 589 3421 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17939g00001 9 356 Monolignol Biosynthesis Gene Families AT5G54160 51.437 8.35e-134 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17939g00001 K13066 - tcc:18589884 450.284