Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1789g00002 ATGCAGAAAAGCCAGAAATCACAACTATCTCGACAAGGTCCAAATACAAATCATCTTTTAAGTAAAAGTTCACAACCAACCTTGCAAATCTTAAAACACCTTGAGCAAAATATACCATCACAACAACAACATTACCATGGGACAAATCTACCCCCAAACAATTTGATGTTGCTTATACAACATTTGATGTTGCAAGGCCTATTGTGGATTATATTTGAGCATAGCATGATCATTGAGTTGAGACAGGAGCTCTTGGTTTCCTCCAACAAGACCATTGAGGGTCGTGGTGTGAACTACATGAACAATGTCATCATTCATGGAATTCACATCAAGAAAATCGTACCCAAAGATGGTGACATGATTAAGGACTCCTACACCCACTTTGGGTTGAGGATAAGGAGCGACGACGATGCCATCTCCATATTGGAGCCTCCAATATTTGGATAG 447 0.3982 MQKSQKSQLSRQGPNTNHLLSKSSQPTLQILKHLEQNIPSQQQHYHGTNLPPNNLMLLIQHLMLQGLLWIIFEHSMIIELRQELLVSSNKTIEGRGVNYMNNVIIHGIHIKKIVPKDGDMIKDSYTHFGLRIRSDDDAISILEPPIFG 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1789g00002 148 PANTHER PECTATE LYASE 18-RELATED 66 142 IPR045032 GO:0030570
Mupr1789g00002 148 SUPERFAMILY Pectin lyase-like 66 141 IPR011050 -
Mupr1789g00002 148 Gene3D - 41 144 IPR012334 -
Mupr1789g00002 148 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1789g00002 Mupr-Chr1789 7399 7881 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1789g00002 66 142 Polysaccharide Lyase AT1G14420 50.562 3.88e-24 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1789g00002 K01728 - gmx:100810615 99.7525