Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17898g00001 ATGTCGGAGAAGTCTTACTGCCCCTTCAAGGATTGTTCTGTTTTGTTGGTGAATTATGGAGAAGTTGTGGCCACTGCTGAGTGCTCCTCTTGTCATAGGCTATATTGTGTGCAATGTAGGGTTCCTTGGCATGGAAACATGAGTTGTAAGGAATTCCAAGAGAATAAAGATGAAAAAGAGTTGGATAACAAGTTTTACAAATTGGCCAAAGAGGAAAATTGGCAGAAATGTCCCCGCTGCACTATGTTTGTCCAAAGTAGTGGTGGATGCGAACACATTACTTGCAGGTGTGGATGCAACTTCTGCTACATTTGTGGGGAGAATTGGGAGTTTGGACATCTATGCATGAAGTAG 354 0.4266 MSEKSYCPFKDCSVLLVNYGEVVATAECSSCHRLYCVQCRVPWHGNMSCKEFQENKDEKELDNKFYKLAKEENWQKCPRCTMFVQSSGGCEHITCRCGCNFCYICGENWEFGHLCMK 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17898g00001 117 SUPERFAMILY RING/U-box 64 115 - -
Mupr17898g00001 117 Gene3D - 46 116 - -
Mupr17898g00001 117 ProSiteProfiles TRIAD supradomain profile. 1 117 IPR044066 -
Mupr17898g00001 117 Pfam IBR domain, a half RING-finger domain 68 113 IPR002867 GO:0008270
Mupr17898g00001 117 Pfam IBR domain, a half RING-finger domain 3 49 IPR002867 GO:0008270
Mupr17898g00001 117 CDD Rcat_RBR_unk 73 109 - -
Mupr17898g00001 117 SMART ibrneu5 1 49 IPR002867 GO:0008270
Mupr17898g00001 117 SMART ibrneu5 59 115 IPR002867 GO:0008270
Mupr17898g00001 117 SUPERFAMILY RING/U-box 5 56 - -
Mupr17898g00001 117 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 4 109 IPR031127 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17898g00001 Mupr-Chr17898 2687 3176 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17898g00001 1 106 C3H Transcription Factor Family AT2G19610 31.356 1.18e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17898g00001 K11975 - vvo:131630288 181.8