Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17877g00001 ATGGAACAAGGAGTTGACTTTGTGATTTTGCAGCAGATTGTTCTTGGTATATTAAGGTTTCTTGTGATGACTGTGTCAGCATCCTTCAGCTACGATGTGTTCCTCAGCTTCAGAGGCTCCGATACTCGCTACGGTTTCACTGGCAATCTCTACAAAGCCCTTTGTGACCGGGGAATTCACACCTTCATTGATCACGAGGAGCTTCAAAGAGGGGACGAAATCGGACCCGCACTTATCCACGCTATTAAACACTCTAGGATGGCCATCCTTGTCTTCTCCAAGAACTATGCGTCTTCTTCCTTTTGCTTAGACGAACTTGTCAAAATCATTGAATGTGTCAAAGCAAAGGGTCGCTTCATTTTGCCAGTTTTTTACGATGTTCATCCTTCTCATATGCGACATCACAATGGAAGTTTTGGAGAAGCGCTCGCTTTGCACAAGGAAAGGTTCATAGCTAGCAAGGAATACCTCAAGGAGAACTTGGAGAGATTGCTCAAATGGAAGATGGCTCTTAACCAAGCAGCTAATGTCTCCGGCAAGCATTACAAACTTGGAAAGGAATATGAACATGAGTTTATAGAGAAGATAGTTAAAGAGGTCTCCAACAAGATTAACCGCACGCCATTGCATGTTGCGGATTACCCCGTTGGGCTGGAGTGTAGAGTGCAAAAAGTAAAGTCACTTCTTGAGTTTGAATCTGATGTTGGAGTCCATATTGTAGGGATTTATGGAATAGGCGGAATGGGCAAAACAACACTTGCTCGAGCAGTTTATAATTCGATTGCAGACCAATTTGAAGGTTTATGTTTTCTTGATGATGTGAGAGAAAGCGCAATTAAACACGGATTAGTACATCTCCAAGAGATGCTCCTTTCTGAAATAGTTGGAGAGAAGGATATGAAGATAGGAAGTGTTAGTAAAGGGATTTCAATAATAAAGCATAGGCTCCAGCGGAAAAAGGTTCTTTTAATTCTTGATGATGTTGACAAACTAGAACAATTGCGAGCAACTGTTGGAGTTGGAGGGCCTAATTGGTTTGGTTCTGGCAGTAGAATCATCATAACTACTCGAGACAAACATTTGCTTGCAAGTCATGGAGTTACTAGAAAATATGAGGTTGAGGGTTTAAATGAGGAAGAAGCACTTGAATTGCTTAGTTGGAATGCTTTTAAAGATGACAAAGTTGATCCAAGTTACAAGGGCATTTCAAATCAAGCAGTGGCTTATGCTTCTGGCCTTCCTCTGGCTTTGGAAGTAGTAGGTTCCCTATTGCTTGGGAAAAGCATAAAAGAATGGGAATCTGCATTAGATCAGTATAAAAAAATTCCCAATAAAAGGATCCAAGATATACTTAAGGTAAGCTACAATGCTTTAGAGGAAGATCAGCAGAAAATTTTTCTTGACATTGCTTGTTGCTTGAAAGGATATGAATTGGCAGAGGTTGAAGATATACTTCGTGCTCATCATGGTGTTTGCATGAAATATGGGATTGGAGTGTTGATAGATAAATCTCTTGTAAAAATTAAGAATGGTTGTGTGACACTTCATGAATTGATAGAGGTTATGGGCAAAGAAATTGATCGGCAAGAATCACCGAACGAGCTTGGGAAACACAGGAGGTTATGGTTCCATAAAGATATAATTCAAGTTTTAGCAGAAAATACAGTGAGTAAGACTGATATGGATGATTCGGGGTCTAGTGAGATTGAAATCATCAATTTGGATTTCCCCTTACTTGAAGAAGATGAAGAAGTATTTGTAGAATGGGATGGAGAGGCCTTCACAAAGATGCAAAACCTCAAAACACTAATCATTAGAAATTCTCATTTTTCAAAAGGCCCCACACATCTTCCAAATAGTTTAAGAGTTTTGGAATGGTGGACATATCCATTGCAGGATTTACCAACTGATTTTCATCCAAATAAACTTGCCATATGCAAATTACCCAGAAGTTGCTTTACATCACTTCAGTTAGCTGGCTTATCGAAGGCAAGTAATTTCATGAATTTGACAGTTTTAAATTTTGACGAGACTGAGTGTTTAACACAAATACCTGACATATCCAGTCTCCAGAATTTAGTAAAATTGACATTTGAATGCTGTGAGAATTTAGTTGCAATTCACGATTCGGTTGGTTTTCTTGATAAACTTAAAAGGTTGAGTGCTTTTGGTTGCAGCAAGCTTATGAGTTTTCCACCCATCAAGTTGACCTCTCTTGAACAACTTGATCTTTCATCTTGTTCAAGTCTAGAGAGTTTTCCAGAAATATTAGGAAAGATGGAAAATATAACACAGCTTGAGTTGAAGTACACTCCAATAAGAGAATTCCCATTTTCATTTAGAAATCTTGCTCGACTTCAAGATTTAGTGCTGGTTGACTGTGGAAGTGTTAAGTTACCGAGTAGCATTGTCATGTTGCCGGAACTGGCTGAGATTTTCGCTCTAGGATGCAAAGGGTGGCTATTGCCAAAACAAGACGAGGATGAAGAAAAAGTGAGCTCAATGTCTTCAAATGTAAAATGTCTTTGTCTCTCGGGCTGCAATCTATCAGATGATTATTTTCCCATGGTTTTAGCGTGGTTTGGTAATGTCAAAGAGTTAGAGCTATCCAGCAATAACTTCACGTTTCTTCCTGAATGCATCAAAGAATGCCACTCTTTAACTTTACTTAATTTGGATAATTGTGAACGTCTACAAGAAATTAGAGGGATTCCACCAAATTTAGAATTTTTCTCTGCGGGAAATTGCAAATCCTTGAGTTTCTGCTGTTCAGCCATGCTATTGAATCAGGAACTGCATGAAGCTGGAAACACCATGTTTTGTTTGCCAGGAGCAAGGATTCCAGAGTGGTTCGAGCAACAGAGTATAGGTCCATTATTATCTTTCTGGTTTCGTAACAAGTTTCCTGTCATGGATTTCTGTTTTGTTATTGGACCAATGGATAAGGACTCTATTTTGTTTAGGCCCATCATGACCATCAATGGCAACACAGTGGAGATACAGTTCTTAACTGAAAAGAGGTTTTGTTTTGACTTCCCAGCATTAGATGATCATATACTTATCATTGGTACAAAATACATCAAGTTTGGAGATAATATGGATAAAGTACTCTCAAAAAATGAATGGAATCATGTGGTGGTTTCCATTGGTATTGATTTTGAACCATCTCCTAAGGAAATGATTGTCAAGCAAAGTGGACTCCACGTAATCAAACCAAAAAGTAGCATGGATGATATCCAATTCACCGATCCTTATAGCCAACCGTCCTTCAAAGAGAAGCATAGATTAGTGGACATAGCAGATTGTCATAGGCAATTTATGCAGCAGCAAATCACTTTGGTTTCATTGAAACCACCACATGTGGGACAGGGTACAGAGTCACTTTCATTGCTTTCACCTCAAGCATGCAAAAATAATATGAATTGGGATTCAAATTCAACTGGAATAAGTAGCACCGCCAGTGTCCACGGCTATGAAATTGCATCACAAAATTTACGGTTGGACATGGGAGTTTTGCAATTTGTGCAGCAGAGAAAAAGATTGGCTATTTTGGGTTTATTGCAACAACGACGCATGGCTTCATTGGGTTTACTGCAACGACGGGGCAGAGAATTGCTTTCATTGCATTCTTCTCCATCATTGAATTTGATGGTAGCATGGCAGAGGAGATGCATCACCAGTGTCCAACGTTTGCAAGAGCAACATTTACCTTCTACCATCAAACAAAACTTTGAAGGCTGTAACAAAGTGAAGGAAATGGTAGAATGCAACAGTAATTATGGAAATGACAACAGCAGCAACCTATTAGTGGAGCAGCTTCCAATGACAAAGATCTTTGAGAGACTTAGTGACCAGAATTTTTGA 3864 0.3916 MEQGVDFVILQQIVLGILRFLVMTVSASFSYDVFLSFRGSDTRYGFTGNLYKALCDRGIHTFIDHEELQRGDEIGPALIHAIKHSRMAILVFSKNYASSSFCLDELVKIIECVKAKGRFILPVFYDVHPSHMRHHNGSFGEALALHKERFIASKEYLKENLERLLKWKMALNQAANVSGKHYKLGKEYEHEFIEKIVKEVSNKINRTPLHVADYPVGLECRVQKVKSLLEFESDVGVHIVGIYGIGGMGKTTLARAVYNSIADQFEGLCFLDDVRESAIKHGLVHLQEMLLSEIVGEKDMKIGSVSKGISIIKHRLQRKKVLLILDDVDKLEQLRATVGVGGPNWFGSGSRIIITTRDKHLLASHGVTRKYEVEGLNEEEALELLSWNAFKDDKVDPSYKGISNQAVAYASGLPLALEVVGSLLLGKSIKEWESALDQYKKIPNKRIQDILKVSYNALEEDQQKIFLDIACCLKGYELAEVEDILRAHHGVCMKYGIGVLIDKSLVKIKNGCVTLHELIEVMGKEIDRQESPNELGKHRRLWFHKDIIQVLAENTVSKTDMDDSGSSEIEIINLDFPLLEEDEEVFVEWDGEAFTKMQNLKTLIIRNSHFSKGPTHLPNSLRVLEWWTYPLQDLPTDFHPNKLAICKLPRSCFTSLQLAGLSKASNFMNLTVLNFDETECLTQIPDISSLQNLVKLTFECCENLVAIHDSVGFLDKLKRLSAFGCSKLMSFPPIKLTSLEQLDLSSCSSLESFPEILGKMENITQLELKYTPIREFPFSFRNLARLQDLVLVDCGSVKLPSSIVMLPELAEIFALGCKGWLLPKQDEDEEKVSSMSSNVKCLCLSGCNLSDDYFPMVLAWFGNVKELELSSNNFTFLPECIKECHSLTLLNLDNCERLQEIRGIPPNLEFFSAGNCKSLSFCCSAMLLNQELHEAGNTMFCLPGARIPEWFEQQSIGPLLSFWFRNKFPVMDFCFVIGPMDKDSILFRPIMTINGNTVEIQFLTEKRFCFDFPALDDHILIIGTKYIKFGDNMDKVLSKNEWNHVVVSIGIDFEPSPKEMIVKQSGLHVIKPKSSMDDIQFTDPYSQPSFKEKHRLVDIADCHRQFMQQQITLVSLKPPHVGQGTESLSLLSPQACKNNMNWDSNSTGISSTASVHGYEIASQNLRLDMGVLQFVQQRKRLAILGLLQQRRMASLGLLQRRGRELLSLHSSPSLNLMVAWQRRCITSVQRLQEQHLPSTIKQNFEGCNKVKEMVECNSNYGNDNSSNLLVEQLPMTKIFERLSDQNF 1287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17877g00001 1287 SMART AAA_5 236 377 IPR003593 GO:0016887
Mupr17877g00001 1287 Gene3D - 375 459 IPR042197 -
Mupr17877g00001 1287 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 31 755 IPR044974 GO:0006952
Mupr17877g00001 1287 PRINTS Disease resistance protein signature 315 329 - -
Mupr17877g00001 1287 PRINTS Disease resistance protein signature 239 254 - -
Mupr17877g00001 1287 PRINTS Disease resistance protein signature 410 424 - -
Mupr17877g00001 1287 PRINTS Disease resistance protein signature 734 750 - -
Mupr17877g00001 1287 Pfam TIR domain 31 208 IPR000157 GO:0007165
Mupr17877g00001 1287 SUPERFAMILY "Winged helix" DNA-binding domain 446 551 IPR036390 -
Mupr17877g00001 1287 Gene3D Ribonuclease Inhibitor 551 823 IPR032675 -
Mupr17877g00001 1287 SUPERFAMILY L domain-like 586 941 - -
Mupr17877g00001 1287 Gene3D - 201 369 IPR027417 -
Mupr17877g00001 1287 Gene3D Ribonuclease Inhibitor 824 951 IPR032675 -
Mupr17877g00001 1287 SUPERFAMILY Toll/Interleukin receptor TIR domain 27 179 IPR035897 -
Mupr17877g00001 1287 Gene3D - 28 200 IPR035897 -
Mupr17877g00001 1287 ProSiteProfiles TIR domain profile. 29 204 IPR000157 GO:0007165
Mupr17877g00001 1287 SMART till_3 30 177 IPR000157 GO:0007165
Mupr17877g00001 1287 FunFam Disease resistance protein (TIR-NBS-LRR class) 27 206 - -
Mupr17877g00001 1287 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 201 469 IPR027417 -
Mupr17877g00001 1287 Pfam NB-ARC domain 221 458 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17877g00001 Mupr-Chr17877 1076 6900 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17877g00001 26 817 WRKY Transcription Factor Family AT4G12020 30.713 3.06e-79 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17877g00001 - - gmx:100814962 2130.52