Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17866g00001 ATGAAAAACACAAACACTACTACTATTGGTTCATCAAAACTTGATCGCAAAACAATCGAAAGGAACCGCAGAATTCACATGAAAGCTCTCTGCTTCAAGCTTGTTTCCATTATTCCTTCCAAGTACCTCAAACCCACCAAGGACATGATTTCCCAGCAGGATCAGCTGGATCTAGCAGCGACGTATATAAAGCATCTGAGAGAAAGAATAGAGAAATTGAAGGGGGAGAAGGAGCAAGCCATGAACATGATTATGAGATCATCAAACCAGAACAATAATAATAGAATTTTCAATATTGACTCTCAGTTGCCTCTACTTGAGATAAGGGACTTGGGTTCCGGCATTGAAGTGACCTTGATAAGTGGCTTGAATAAGAACTTTATGCTCTACGAAGTTATTAGTGTCCTTGAGGAAGAGGGCGCTGAAGTTGTCACTGCTAACTTCTCTACTGTTGCTGATAAGATATTTTACACCGTTCATGCTCAGGTTAAAATATCAAGAGTTGGTGTTGAGCCAAATAGGGTATATCAAAGGCTTCAGGAGTTGATTGCACCACTAGAAAGTTGGGAGTACATTTCATGA 582 0.4003 MKNTNTTTIGSSKLDRKTIERNRRIHMKALCFKLVSIIPSKYLKPTKDMISQQDQLDLAATYIKHLRERIEKLKGEKEQAMNMIMRSSNQNNNNRIFNIDSQLPLLEIRDLGSGIEVTLISGLNKNFMLYEVISVLEEEGAEVVTANFSTVADKIFYTVHAQVKISRVGVEPNRVYQRLQELIAPLESWEYIS 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17866g00001 193 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 11 66 IPR011598 GO:0046983
Mupr17866g00001 193 FunFam Transcription factor bHLH162 4 95 - -
Mupr17866g00001 193 Gene3D - 4 99 IPR036638 GO:0046983
Mupr17866g00001 193 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 15 83 IPR036638 GO:0046983
Mupr17866g00001 193 Coils Coil 63 90 - -
Mupr17866g00001 193 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 8 182 - -
Mupr17866g00001 193 Pfam Helix-loop-helix DNA-binding domain 16 67 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17866g00001 Mupr-Chr17866 6436 7481 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17866g00001 1 183 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 32.642 6.52e-27 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr17866g00001 HLH 2.7e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17866g00001 - - vun:114179389 308.531