Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1785g00006 ATGCAATACGTGAACAATGTCATCATCCATGGAATTCACATCAAGAAAATTGTACCCAAAGATGGTGACATGATTAAGGACTCTTACACCCACTTTGGGTTGATGATAAGGAGCGATGATCATGTTTCCCTCTTTGACTCCGTTGATGGTCTTATCGATGTCATCATGGACTTCATCGTCATCACCATCTCAAATTTCCATATGACTAAACATAACGATGTGATGCTATTTGGGCCTGATACCAACACCAAACCTTGGACCACCTTGCCATTAAAAAAATGCCAGAACTTAGAGCCAAGAAATAAAAATGAGATCACAAGTCATGAAAGGGATAATGGTGACCAGAGTTGCAATGGTTCTTTTGGAAGAGATAATGGCGACCAAAGGGCAAAAAACAATCAACACTTACAGCAAAATGACAAAATAAAAGCACGAGTCATGGAGAACGTAATGGTTGGTACTGCAACCAAGGTTTCTTTCGCCCTCTTGATCACTTTGGTCATTATCATTCCATGCCTCGAGAACGGCATTGGTGAGTTCGATAATTTTCTAAAGAACCAAACTGAGGAAGCCTACAAAATTGCTCTCGATGCCTATGTCTCGACCCCTAAAGATGTCACTAATGAACTCAATCTCTATCATAGGAAAACAGCACAGCTACAAGGAGATAAGGTGGCGTGGCGTATGGATTCAACTGTAATGGCATGTTCAGGGATTGCGCCATTAAGGATGGATTCATGGAGGTCAGAATCTGGGACTAGTTTTGCACATGATCCTTTGGGAGCTTTCAAGACCTCCAAGTATTGGAAATTTTAG 816 0.413 MQYVNNVIIHGIHIKKIVPKDGDMIKDSYTHFGLMIRSDDHVSLFDSVDGLIDVIMDFIVITISNFHMTKHNDVMLFGPDTNTKPWTTLPLKKCQNLEPRNKNEITSHERDNGDQSCNGSFGRDNGDQRAKNNQHLQQNDKIKARVMENVMVGTATKVSFALLITLVIIIPCLENGIGEFDNFLKNQTEEAYKIALDAYVSTPKDVTNELNLYHRKTAQLQGDKVAWRMDSTVMACSGIAPLRMDSWRSESGTSFAHDPLGAFKTSKYWKF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1785g00006 271 Pfam Pectate lyase, N terminus 177 217 IPR007524 GO:0030570
Mupr1785g00006 271 SUPERFAMILY Pectin lyase-like 2 81 IPR011050 -
Mupr1785g00006 271 MobiDBLite consensus disorder prediction 112 127 - -
Mupr1785g00006 271 Gene3D - 1 97 IPR012334 -
Mupr1785g00006 271 MobiDBLite consensus disorder prediction 103 139 - -
Mupr1785g00006 271 PANTHER PECTATE LYASE 18-RELATED 1 83 IPR045032 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1785g00006 Mupr-Chr1785 28081 31660 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1785g00006 1 82 Polysaccharide Lyase AT3G01270 46.875 1.59e-19 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1785g00006 K01728 - gmx:100785801 93.9745