Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17847g00001 ATGGCCAAACGCAGGGAATGTTGGATTCTCCACAGCCCCAAAGCACGTGTTTCCAGTGCTTGTAATTGGTTCCTGGATATTCCAATTGAATGGAGAAGCCAAGAGGAGAGCTCTTCCAATGCTTTGCTTTCTCCCAAGGGAGTAAACTTTGAAGTGCAAGCTTTAATTGGCATAAAAGCTTCTCTAGTGGATCCTCATGGTATTCTAGATAATTGGGATGGGGATGCTGTTGATCCATGCAGCTGGAACATGGTTACATGTTCCGCTGAGTACTTTGTTATTAGCCTGGGCATTCCCAGTCAAAATTTATCTGGGACTCTTTCTCCAAGCATAGGAAACCTAACAAATCTTCAAACTGTGGTGCTGCAAAATAACAACATAACTGGACCAATCCCTTCAGAGATAGGAAAACTTTCCAAGCTTCGAACTCTTGATCTCTCTGACAACTTCTTCAATGGGGAAATTCCTCCCTCTTTGGGTCACCTGAGAAACCTCCAATACTTTATTGTTGGAAACCCCCTCGTCTGCGCTACAGAAAAAGAAAAAAATTGCCATGGGATGACACTTATGCCTATGTCAATGAACTTGAACAGTACTGAAGATGCTTTACCATCATTAGGCAGAACAAAGGTTCACAAAATGGCCATAGCCTTTGGTTTGAGTCTTGGATGCATCTGCTTGATAGTTCTTGGTTTTGGACTTGTTCTATGGAGGAGGCACAAGCATAAACAACAGGCATTCTTTGATGTTAAAGACCGGCATCATGAAGAAGTCTACCTTGGAAACTTGAAGAGGTTCCAATTAAGAGAACTCCAGATTGCTACCAACAACTTCAGCAACAAAAACATTCTTGGAAAGGGTGGTTTTGGAAATGTCTACAAAGGAGTTCTCCCAGATGGCACTCTTGTAGCAGTCAAGAGGCTTAAAGATGGCAATGCCATTGGAGGAGATATACAATTTCAGACTGAAGTTGAAATGATCAGCTTGGCAGTGCACAGAAATCTCCTCAAACTGTATGGATTTTGCATGACACCAACAGAAAGGCTTTTGGTTTATCCTTACATGTCCAATGGCAGTAAGCCAGTGTTGGACTGGGGCACAAGGAAGCAAATTGCCTTAGGAGCAGCAAGGGGACTACTATACCTTCATGAGCAGTGTGATCCAAAGATAATCCATAGAGATGTGAAGGCTGCAAATATATTGCTTGATGACTATTGTGAGGCAGTGGTAGGAGATTTTGGGTTGGCAAAGCTTTTAGATCACCAAGATTCACATGTCACAACTGCAGTGAGGGGCACAGTGGGGCATATTGCACCAGAGTATCTTTCCACAGGGCAATCTTCTGAGAAGACTGATGTCTTTGGATTTGGTATTCTGCTTCTTGAATTGATCACAGGCCTGAGGGCTCTAGAGTTTGGAAAAGCAGCCAACCAAAAAGGAGCCATGCTTGATTGGGTAAGGAAAATTCATCTAGAGAAGAAGCTTGAGTTGCTTGTTGACAAGGATCTAAAGAACAACTATGACCGGATTGAGCTTGAGGAAATAGTTCAAGTGGCACTCTTGTGTACCCAATACCTTCCGGGCCACAGGCCCAAAATGTCTGAAGTTGTACGCATGCTTGAAGGTGATGGGCTTGCTGAGAAATGGGAAGCCTCTCAAAGTTCTGACACTACTAAGTACAAACCACATGAACTCTCTTCATCAGATAGGTATTCTGACCTCACTGATGACTCTTCACTGTTAGTCCAGGCCATGGAACTCTCAGGCCCAAGTTTGTAA 1779 0.4345 MAKRRECWILHSPKARVSSACNWFLDIPIEWRSQEESSSNALLSPKGVNFEVQALIGIKASLVDPHGILDNWDGDAVDPCSWNMVTCSAEYFVISLGIPSQNLSGTLSPSIGNLTNLQTVVLQNNNITGPIPSEIGKLSKLRTLDLSDNFFNGEIPPSLGHLRNLQYFIVGNPLVCATEKEKNCHGMTLMPMSMNLNSTEDALPSLGRTKVHKMAIAFGLSLGCICLIVLGFGLVLWRRHKHKQQAFFDVKDRHHEEVYLGNLKRFQLRELQIATNNFSNKNILGKGGFGNVYKGVLPDGTLVAVKRLKDGNAIGGDIQFQTEVEMISLAVHRNLLKLYGFCMTPTERLLVYPYMSNGSKPVLDWGTRKQIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGLRALEFGKAANQKGAMLDWVRKIHLEKKLELLVDKDLKNNYDRIELEEIVQVALLCTQYLPGHRPKMSEVVRMLEGDGLAEKWEASQSSDTTKYKPHELSSSDRYSDLTDDSSLLVQAMELSGPSL 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17847g00001 592 FunFam Somatic embryogenesis receptor-like kinase 1 351 560 - -
Mupr17847g00001 592 MobiDBLite consensus disorder prediction 550 573 - -
Mupr17847g00001 592 ProSitePatterns Protein kinases ATP-binding region signature. 284 306 IPR017441 GO:0005524
Mupr17847g00001 592 FunFam Leucine-rich repeat receptor-like kinase 50 178 - -
Mupr17847g00001 592 Gene3D Phosphorylase Kinase; domain 1 247 352 - -
Mupr17847g00001 592 SUPERFAMILY Protein kinase-like (PK-like) 262 554 IPR011009 -
Mupr17847g00001 592 FunFam Somatic embryogenesis receptor kinase 1 247 354 - -
Mupr17847g00001 592 Gene3D Ribonuclease Inhibitor 48 215 IPR032675 -
Mupr17847g00001 592 Pfam Leucine rich repeat N-terminal domain 51 88 IPR013210 -
Mupr17847g00001 592 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 50 551 - -
Mupr17847g00001 592 Pfam Protein kinase domain 279 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr17847g00001 592 ProSiteProfiles Protein kinase domain profile. 278 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr17847g00001 592 ProSitePatterns Serine/Threonine protein kinases active-site signature. 390 402 IPR008271 GO:0004672|GO:0006468
Mupr17847g00001 592 SUPERFAMILY L domain-like 51 176 - -
Mupr17847g00001 592 SMART serkin_6 278 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr17847g00001 592 Gene3D Transferase(Phosphotransferase) domain 1 353 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17847g00001 Mupr-Chr17847 4042 9625 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17847g00001 37 590 Receptor kinase-like Gene Family AT5G16000 71.732 0.0 865
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mupr17847g00001 Pkinase 7.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17847g00001 - - gmx:100305388 1019.61