Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17846g00001 ATGGCGACATATTTTCATAGTAACTCCGAAATTCAAGCCGGTGCTGACGGCCTTCAAACTCTCGTACTAATGAACCCTGGCTATGTCCAATACTCTGACACGCCGCCGCCACCCCATGGCGGAAACCTCGTGTTCCTCAACTCCACCGTCGCCGGCAACAGCTCCCTGCAGAACCTTCCCCACGCGCCGCCCCCTCACACGCAGCAATTCGTGGGCGTGCCGCTCTCCGCCACCGTACAGGAGCCACCGCCGTCCATGCACCACGATGTCTCCGCCCTGCATGGCTTCCTGCCGCGCATGCAGTACAACCTCTGGAACACAATCGACCCCAGCGCGGCGGCGGCGCGTGAGGCTCCACGCGCCACCCAGGGGCTGTCGCTGAGCCTGCACGGCGACGAGGTGCGCGCGCCGTCGTCTTCCGCATCTGCGGTCTCCAACAGCGGCGGCGTGGCGGGGATTCAGAGCGTGCTCTTGAGCTCCAAGTACTTGAAGGCCGCGCAGGAACTTCTGGACGAGGTTGTCAATGTTAACAGCGGAATTAAGGCTGAACAAGTGAAGAAGAGCTTCGAGAAAACTAAGGTTGTTGGGGAATCATCAACCGCAGTCAGTGGTGACGGTTCTGTTGCTGGAGAGGGAAGTGGAAAGCGTAGCTCTGAATTGTCAACTACAGATAGACAAGAAATTCAGATGAAGAAAGCAAAGCTAATTAACATGCTTGATGAGGTGGAGCAAAGGTACAGGCAATACCACAACCAGATACAGATAGTGATATGCTCTTTTGAGCAAGCTGCAGGGATTGGGTCAGGGAGAACATACACTGCGCTTGCACTTCAAACAATTTCAAAGCAATTTCGGTGTTTGAAGGATGCTATAATGGGGCAAATTAAAGCCGCAAATAAGAGTTTGGGAGAAGAGGATTGTTTTGGGGGCAAAATTGAAGGTTCAAGGCTCAAATATGTGGACCATCATCTACGGCAACAGAAAGCTATCCAACAGTTGGGAATGATCCATCAAAATGCTTGGAGACCCCAGAGAGGATTGCCAGAGAGATCCGTCTCTGTCCTACGTGCTTGGCTCTTTGAACACTTTCTCCACCCTTACCCAAAGGACTCGGACAAACACATGCTTGCAAAACAAACTGGGCTTACCAGGAGCCAGGTTTCAAATTGGTTCATAAATGCTCGAGTTCGACTTTGGAAGCCAATGGTAGAGGAAATGTACTTGGAGGAGATGAAAGAGCACGAACTAAACAAGTCTGAGGAGAAATCAAGCAAGAGCGGTGAAGATCCTATTATGAAAACAACAAGTCCACAAGAGAAACTTCCTACCTCTGAAATGGAATCTAAAAGTTTCACTTCCAAACAAGATGTTTCTAAAAACCAGAACACTCCAATGGTCTCAACTTCTCCACATTCAACATCACCTATTGGAGGAAATGTTAAGAATCAATCAGGATTCAGTTTCATTGGGTCATCAGAGCTAGATGGAATGACACAAGGAAGCCCTAAGAAATCAAGGAGCCATGAAATTTTTCACTCTCCAAACCACGTCAAAGCCAATGAGGCAAACAACGAACAACAACAACTCTCAATGGATGATAAGCATAGTAGGGATGGGTACTCTTTCATGGGGAACCAAACAAACTTCATTAGTGGTTTTGGACAATACCCAATTGAGGAAATTGGTAGGTTTGATGCTGAGCAATTTGCACCAAGGTTTTCAGGTAATGGAGTTTCCCTCACTCTTGGTCTTCCTCATTGTGACACATTGTCAGGAACCCATCAAACCTTTCTCCCAAGCCAAAACATTCAACTAGGAAGAGGGTTGGACATTGGTGAGCCAAACCAGTTTGGTGCCTTAAACAATTCTTCTTCTCACTCTTCAGCGGCATTTGAGACTATCGACATACATAACCCAAAGAGATGGGATAGATGGGTTGGTGTCATAAATTTTCAATTGGCACGCGTGAAGCAATGTAGTAGGAATGCTTGCATGCCTGAAGGAAGATCCTCCTCTTTTATTTGGTTGTGGCATGGGAGTAAGGATAATGATAGATAG 2058 0.4801 MATYFHSNSEIQAGADGLQTLVLMNPGYVQYSDTPPPPHGGNLVFLNSTVAGNSSLQNLPHAPPPHTQQFVGVPLSATVQEPPPSMHHDVSALHGFLPRMQYNLWNTIDPSAAAAREAPRATQGLSLSLHGDEVRAPSSSASAVSNSGGVAGIQSVLLSSKYLKAAQELLDEVVNVNSGIKAEQVKKSFEKTKVVGESSTAVSGDGSVAGEGSGKRSSELSTTDRQEIQMKKAKLINMLDEVEQRYRQYHNQIQIVICSFEQAAGIGSGRTYTALALQTISKQFRCLKDAIMGQIKAANKSLGEEDCFGGKIEGSRLKYVDHHLRQQKAIQQLGMIHQNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEMKEHELNKSEEKSSKSGEDPIMKTTSPQEKLPTSEMESKSFTSKQDVSKNQNTPMVSTSPHSTSPIGGNVKNQSGFSFIGSSELDGMTQGSPKKSRSHEIFHSPNHVKANEANNEQQQLSMDDKHSRDGYSFMGNQTNFISGFGQYPIEEIGRFDAEQFAPRFSGNGVSLTLGLPHCDTLSGTHQTFLPSQNIQLGRGLDIGEPNQFGALNNSSSHSSAAFETIDIHNPKRWDRWVGVINFQLARVKQCSRNACMPEGRSSSFIWLWHGSKDNDR 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17846g00001 685 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 81 425 - -
Mupr17846g00001 685 MobiDBLite consensus disorder prediction 413 428 - -
Mupr17846g00001 685 MobiDBLite consensus disorder prediction 200 225 - -
Mupr17846g00001 685 Coils Coil 225 252 - -
Mupr17846g00001 685 SMART HOX_1 341 405 IPR001356 GO:0003677
Mupr17846g00001 685 MobiDBLite consensus disorder prediction 413 509 - -
Mupr17846g00001 685 ProSiteProfiles 'Homeobox' domain profile. 338 401 IPR001356 GO:0003677
Mupr17846g00001 685 Pfam Associated with HOX 156 292 IPR006563 -
Mupr17846g00001 685 Pfam Homeobox KN domain 358 397 IPR008422 GO:0003677|GO:0006355
Mupr17846g00001 685 Gene3D - 344 424 - -
Mupr17846g00001 685 SMART prehox3 151 293 IPR006563 -
Mupr17846g00001 685 CDD homeodomain 341 402 IPR001356 GO:0003677
Mupr17846g00001 685 MobiDBLite consensus disorder prediction 429 504 - -
Mupr17846g00001 685 FunFam BEL1-like homeodomain protein 9 344 406 - -
Mupr17846g00001 685 SUPERFAMILY Homeodomain-like 342 408 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17846g00001 Mupr-Chr17846 2756 7160 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17846g00001 1 618 Homeobox Transcription Factor Family AT2G35940 49.570 1.11e-168 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mupr17846g00001 POX 7.5e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17846g00001 - - gmx:100810851 1076.23