Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1782g00007 ATGGACATGGCATCTCGCCCCCGCAGCGTTGAAGGGATCTTCAAGGACTATAGAGGCAGAAGAAACGCTCTTATTCGCGCTCTCACAATCGGTACTACTCTTCTCTTTCTTTTCACCCTTTACTTTCCAACTTCCTCACTTTTTTACCCTTTTCTTCTCGCAGACGTTAATGAATTTTACGGCCTCTGCGATCCAGATAAGGAAAACTTGAGCCTCTATGGTCATCCAAATGACACCTGGGAAGTAGCTCTGCCAGTGGAGGAAGTTCCACCGGATCTCCCTGAACCAGCTCTTGGAATCAATTTTGCTAGGGATGATCTTGACCGCAGCAACTGGCTTTCTCTGGTTGCTGTGCATAGTGATTCGTGGTTGCTTTCTGTAGCCTTTTACCATGGAGCGCGTCTTAACAACAATGAAAGGAAGCGTTTATTTGATTTGATCAATGATTTTCCAACTATTTTTGAAGTTGTGACTGGCAAGAAACCAATTAAGGACAAGCCCACCGTGGCTAGTGGAAGCAAATCTCGGGGAAACACCAAGAAATCTAGTGACAGGAAAGCTAAAAGCATCGCAAAGTTTGCAGATGAGGGTTATGAAGAGGCTGAAGATGAGCATCATGAAACACTTTGTGGAAGCTGTTGTGGAAATTACAATGCAGATGAGTTTTGGATCGGCTGCGATATTTGTGAGCGTTGGTTCCATGGGAAGTGTGTTAATATTACCCCTGCAAAGGCTGAGAGCATAAAGCTATATAAA 756 0.4444 MDMASRPRSVEGIFKDYRGRRNALIRALTIGTTLLFLFTLYFPTSSLFYPFLLADVNEFYGLCDPDKENLSLYGHPNDTWEVALPVEEVPPDLPEPALGINFARDDLDRSNWLSLVAVHSDSWLLSVAFYHGARLNNNERKRLFDLINDFPTIFEVVTGKKPIKDKPTVASGSKSRGNTKKSSDRKAKSIAKFADEGYEEAEDEHHETLCGSCCGNYNADEFWIGCDICERWFHGKCVNITPAKAESIKLYK 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1782g00007 252 MobiDBLite consensus disorder prediction 165 187 - -
Mupr1782g00007 252 SUPERFAMILY FYVE/PHD zinc finger 198 251 IPR011011 -
Mupr1782g00007 252 Pfam Alfin 52 159 IPR021998 GO:0006355|GO:0042393
Mupr1782g00007 252 FunFam PHD finger alfin-like protein 202 252 - -
Mupr1782g00007 252 CDD PHD_AL_plant 209 252 IPR044104 -
Mupr1782g00007 252 Pfam PHD-finger 210 247 IPR019787 -
Mupr1782g00007 252 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 200 252 IPR013083 -
Mupr1782g00007 252 PANTHER CPG BINDING PROTEIN 6 252 IPR045104 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1782g00007 Mupr-Chr1782 47787 51919 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1782g00007 4 252 Alfin-like Transcription Factor Family AT5G05610 62.800 3.38e-95 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mupr1782g00007 Alfin 6.6e-53 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1782g00007 K26274 - gmx:100793126 350.903