Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1782g00004 ATGAGGAATGTGATGGTCAAGCGTGCTATAGAATTTAGAGTCGCCATACGCATTGTGTGGAGCAGGACGTGGCTGATCGTGCTTGTGGAGCAATTTTTTGTTTATTTTCGTGAGTCATTGACGTGTTATGTTATATATACTGTGATGCTTGCAACAGAAGTAGAGATGGCAAGTCGAGTGAAGGAAGATGAGAAAAATGAACGAATAATTCGAGGTCTTCTCAAACTCGCACCAAATCGAAGATGTATTAACTGTAACAGCCTGGGACCCCAATATGTGTGCACAAATTTCTGGACGTTTGTTTGCACTAACTGTAGCGGAATACACCGAGAGTTTACACATCGGGTAAAATCGATTTCAATGGCTAAGTTTTCTGCACAGGAAGTTAGTGCACTTCAAGAAGGAGGAAATGAGCGTGCAAAAGAAATCTATTTTAAAGAATGGGATCCACAACGGTGCATTATTCTGATTAGCATATCTGGTGCCAGCAATATTGACAGGCTCCGGAACTTCATTAAGCATGTTTATGTGGATAGAATATTCAGCGGTGAGAGGACCTATGACAAACCTCCAAGAGTAAAGGGTGACAAGGATGATTTCTATGAAAACAAGCGGATGGAGATGTATCAGGGCGGACCTAAAAGCCCAGCATATGAAGACACATATGAACGTCGTTACAGCGACAGGTCTAGTCCTGGTGGAAGAAGTCCTGGATATGATCAAGAAAATAGGCATTATGGTGATTACAAGAGAAGTCCTGGTCATCCTCCAATAATCAATGATTGGCGTCGAGAAGATAGATTTGGAAATGGACAGAAATTTGAAGATCATAGAACATCTGATGGAAATAATAAAGTGGAAAGCCATTCTCCTGAGCAAACCCAGGATCTGGATTCTTCCAGCCCACCTGTGGTCCGACCTGTTAGAGAGATCTTGGGAGAAAATGTAGTACCTCTTCGAATTAGTGAACCCCCCAAAACAAACAGTGGACAGGCTGCTAATGGCTCAGGACTCACACAGAGAACTGCATCTTCCAGTAGCTTGGCATCCAGCAATGGAACTCCATCAGAAGTTAAGCTTGAAACTATTAAGAGCCTTATTGATTTTGATGCTGATCCTGAACCGCCTGTTGCTCCAGCAATTCCTCAAGCCCAGCAAACTACTGTAGCTCAACTTGGGATGCCTGCAAATTCCAATGATAATAATTGGGCCTCTTTTGATGTTGCTCCTGAGGCAAAAGCATCTCAGGGTCCTTCAAATGTAAATCCACTGGAATCTGTGCTGTCTCAATTGTCAGTACCAGTATCTTTACCTGCTCAAGTTTCTGGAGCCCAAGGACCTGTAATGGGATCAGCTCTTACTGCTACTGCTGCTGGAGCTCCAATCATTAGCAGCTTTTCAACAATCCCAGCCAGTGGTGCTTCAGTAACACCTTCTGGAGTGATGACAACATCATCTCTCAATAATGCAGGACAGTGGGCTAGTTTGCAGTATCATCAACAGCAACCTTTGTTCACTGCTGCTGCTAGTCAGCCTACTATTCAACAGTCTACACAAGTTGGTAGAGCTTTGAATAATCAGCCCTGGAGTGTTCCTTCTGTACCATCAGTACAGGGGAATCCAAGCACACCAATGCCTCATGCATCACATCTTGTCCCAATGTCTGCCAATGAGGCTAAACCCAGTGTTGTTTTACAACCTTCTACAGTAGACATAAAACCAAGTGGAAGAAGCGAGCTTCCTGAGGATCTATTCACTGTAAAATATTCATCCTTCCCTGCTCCAGTCCCAGGTTGGCAAATGGGTTCACCTCCTAGCATGGGTATCTCAACTCAATATAATAATGTGGTGCCCATGCCAAGTTTTCCACAACCATCAAAATCAACAAATCCATTTGATGTCAGCAACGAACCAACTCCAGTTCAAGCCCCAACATTTCCTTCCATGACATCTTTGCAAGGTGCTCTGCCTAGTGTAACACCTTCCGCTACAATGCACCCTTCAAACATGGGAAATCTGTCTCTTGCCTGGAATCCAGCCTCATCATCATCATATGCATCATTGCCGCCTCCTCAAGCACAAACTCTTGCACTAGCAATGGGACCAGGGGCATACATGGGGCAACAAATAGCAACTGACATGCCAATGCCAAGGCATCAAGGATTTGGGAGTTTTGCTACCGAGGGAACTGCTTTTGGATTATCAAATCCTAATCAGCAGCTGACTGGTAGGTTGTCAACTGCTGTTATCCCAAACCCTTACCGTGCAGGAGGAGGGAACCCTTTCGGATGA 2292 0.4446 MRNVMVKRAIEFRVAIRIVWSRTWLIVLVEQFFVYFRESLTCYVIYTVMLATEVEMASRVKEDEKNERIIRGLLKLAPNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSISMAKFSAQEVSALQEGGNERAKEIYFKEWDPQRCIILISISGASNIDRLRNFIKHVYVDRIFSGERTYDKPPRVKGDKDDFYENKRMEMYQGGPKSPAYEDTYERRYSDRSSPGGRSPGYDQENRHYGDYKRSPGHPPIINDWRREDRFGNGQKFEDHRTSDGNNKVESHSPEQTQDLDSSSPPVVRPVREILGENVVPLRISEPPKTNSGQAANGSGLTQRTASSSSLASSNGTPSEVKLETIKSLIDFDADPEPPVAPAIPQAQQTTVAQLGMPANSNDNNWASFDVAPEAKASQGPSNVNPLESVLSQLSVPVSLPAQVSGAQGPVMGSALTATAAGAPIISSFSTIPASGASVTPSGVMTTSSLNNAGQWASLQYHQQQPLFTAAASQPTIQQSTQVGRALNNQPWSVPSVPSVQGNPSTPMPHASHLVPMSANEAKPSVVLQPSTVDIKPSGRSELPEDLFTVKYSSFPAPVPGWQMGSPPSMGISTQYNNVVPMPSFPQPSKSTNPFDVSNEPTPVQAPTFPSMTSLQGALPSVTPSATMHPSNMGNLSLAWNPASSSSYASLPPPQAQTLALAMGPGAYMGQQIATDMPMPRHQGFGSFATEGTAFGLSNPNQQLTGRLSTAVIPNPYRAGGGNPFG 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1782g00004 763 FunFam Arf-GAP domain and FG repeat-containing protein 1 56 194 - -
Mupr1782g00004 763 Pfam Putative GTPase activating protein for Arf 68 182 IPR001164 GO:0005096
Mupr1782g00004 763 ProSiteProfiles ARF GTPase-activating proteins domain profile. 67 144 IPR001164 GO:0005096
Mupr1782g00004 763 MobiDBLite consensus disorder prediction 322 357 - -
Mupr1782g00004 763 CDD ArfGap_AGFG 67 181 - -
Mupr1782g00004 763 PANTHER ARFGAP/RECO-RELATED 56 763 IPR044820 GO:0005096
Mupr1782g00004 763 SMART arf_gap_3 67 189 IPR001164 GO:0005096
Mupr1782g00004 763 MobiDBLite consensus disorder prediction 187 357 - -
Mupr1782g00004 763 MobiDBLite consensus disorder prediction 286 301 - -
Mupr1782g00004 763 MobiDBLite consensus disorder prediction 187 205 - -
Mupr1782g00004 763 MobiDBLite consensus disorder prediction 241 285 - -
Mupr1782g00004 763 Gene3D Arf GTPase activating protein 56 190 IPR038508 -
Mupr1782g00004 763 SUPERFAMILY ArfGap/RecO-like zinc finger 66 181 IPR037278 -
Mupr1782g00004 763 PRINTS HIV Rev interacting protein signature 98 115 IPR001164 GO:0005096
Mupr1782g00004 763 PRINTS HIV Rev interacting protein signature 116 137 IPR001164 GO:0005096
Mupr1782g00004 763 PRINTS HIV Rev interacting protein signature 79 98 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1782g00004 Mupr-Chr1782 24275 32704 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1782g00004 67 153 C2H2 Transcription Factor Family AT4G05330 36.264 8.96e-11 62.4