Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17828g00001 ATGGCCGAGGACTGGGATCTCTTTGCCGTCGTGAGAAGCTGCCAATCAGCCACCACAGAAATTCCACAAACCACTACCACCAATACTTTCTCTTCCTCGGTCACTTCCACCGTCAAGGAAGAAAAATACGATGCATTTTCTTTTCCCAATATAGTGCAACCTATAACCAGTGAGTTTCAAGAGCTGAACCAATTGTTCACACCCTTCAACCCCACTACCACTAGTGCTCTTGGCATCAATCCTAATTCCCCTTATTTTGCAGAACAAGAAAGCCACCAACATGACCATCTTCATCTCCTTCCTCCTCCTACTCACACCTCCATTTGGCCTCATTTTCTGCCACAACCCTCCACTCACAGATTCCATAACCAACAACAACAGCAACAGGTGCTTCAGAAACAGGAATTTCAGGTACCCCAGAACAATTCCCCTACAGTTTCACCAAATACACAACCTCAAACACCCAAATCAAGAAAAAGAAAAAGCCAACAGAAAAAAATGGTGTGCCATGTAACAGCAGATAACCTCTCAGCAGATTTGTGGGCATGGCGGAAATACGGACAAAAACCAATTAAGGGTTCCCCGTATCCAAGGAACTACTATAGGTGCAGCAGCTCCAAAGGCTGTGTGGCTCGAAAACAAGTTGAACGGAGCAACACTGAAACCGACATGTTCATCGTTACGTACACCGGAGACCACTCGCATCCCCGCCCCACCCACCGGAACTCGCTCGCCGGAAGCACCCGGAGTAAGACTCCGACGACGAACCCGCCGCCGTCACCCGGGTCACTCTCCTTCCAAGCTGCCCCCTTTTCTTCTTCTTCTTCGCCACCACACTCTCCGGCGACGACGTCGGAAGAGCCACCGGAAAACGACGCAGAACCCGACCAGGAAATGGAAACCGACGTCGAAGATAACGCCTTCTTTTCCAGCAAGTCTTGCAGAGGGTCTCATCGAAGTGACGTCGTCTCCAAGAACAAAACCGGTTTGATTTCGTCTTTTGTTAACCGATTTTCGGACCGGTTTCGTTTAATTGATGATTGTGCGGATCAGGAGACGCAGTCTGCTTCTCATTCTCCAAATCAAAGTCGTATACTTGAATCTTGGGCGTAG 1113 0.4897 MAEDWDLFAVVRSCQSATTEIPQTTTTNTFSSSVTSTVKEEKYDAFSFPNIVQPITSEFQELNQLFTPFNPTTTSALGINPNSPYFAEQESHQHDHLHLLPPPTHTSIWPHFLPQPSTHRFHNQQQQQQVLQKQEFQVPQNNSPTVSPNTQPQTPKSRKRKSQQKKMVCHVTADNLSADLWAWRKYGQKPIKGSPYPRNYYRCSSSKGCVARKQVERSNTETDMFIVTYTGDHSHPRPTHRNSLAGSTRSKTPTTNPPPSPGSLSFQAAPFSSSSSPPHSPATTSEEPPENDAEPDQEMETDVEDNAFFSSKSCRGSHRSDVVSKNKTGLISSFVNRFSDRFRLIDDCADQETQSASHSPNQSRILESWA 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17828g00001 370 MobiDBLite consensus disorder prediction 228 327 - -
Mupr17828g00001 370 MobiDBLite consensus disorder prediction 350 370 - -
Mupr17828g00001 370 Pfam WRKY DNA -binding domain 179 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr17828g00001 370 MobiDBLite consensus disorder prediction 289 303 - -
Mupr17828g00001 370 FunFam WRKY transcription factor 22 160 231 - -
Mupr17828g00001 370 MobiDBLite consensus disorder prediction 113 167 - -
Mupr17828g00001 370 MobiDBLite consensus disorder prediction 113 157 - -
Mupr17828g00001 370 MobiDBLite consensus disorder prediction 304 327 - -
Mupr17828g00001 370 MobiDBLite consensus disorder prediction 265 287 - -
Mupr17828g00001 370 Gene3D WRKY domain 160 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr17828g00001 370 ProSiteProfiles WRKY domain profile. 172 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr17828g00001 370 SMART WRKY_cls 177 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr17828g00001 370 SUPERFAMILY WRKY DNA-binding domain 172 238 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr17828g00001 370 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 321 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17828g00001 Mupr-Chr17828 2183 3589 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17828g00001 156 261 WRKY Transcription Factor Family AT5G52830 78.302 2.28e-57 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mupr17828g00001 WRKY 1.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17828g00001 - - gmx:100792164 407.527