LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr17787g00002	ATGGCAGCTGCAACATCTGGTGCTGTGTTAAATGGGTTGGGATCTTCCTTCTTGAGTGGAGGAAAGAGGAGCCAAACCCTTCTGGCCACTGCTATTGGAGGCAAAGTTGGTGTTGCTGCTGTTAGTCCTAGAAGACTCATTGTGGTAGCTGCTGCTGCACCAAAGAAGTCATGGCTTCCTGGTGTTAGAGGTGGTGGCAATTTCGTCGACCCAGAATGGCTTGATGGATCGCTACCAGGTGACTATGGTTTTGACCCACTAGGCCTAGGCAAGGACCCAGCATTCCTGAAATGGTACAGAGAAGCTGAGCTGATTCATGGGCGGTGGGCAATGACTGCAGTTCTAGGCATCTTTGTGGGGCAGGCCTGGAGTGGAGTGCCATGGTTTGAGGCTGGAGCTGACCCCAATGCAATTGCTCCTTTCTCCTTTGGAACTCTTCTGGGAACCCAGTTGCTTCTCATGGGGTGGGTTGAGAGCAAGAGATGGGTGGACTTCTTCAACCCAGACTCACAGTCAGTGGAATGGGCCACTCCATGGTCAAGAACAGCTGAGAACTTTTCCAATGCCACTGGTGAACAAGGCTACCCAGGTGGCAAGTTCTTTGACCCTTTGAGCTTTGCTGGCACTATCCAGAATGGAGTTTACATTCCGGATATAGACAAGCTTGAAAGATTGAAATTGGCTGAGATTAAGCATGCTAGGATTGCTATGTTGGCCATGCTCATTTTCTACTTTGAGGCTGGACAAGGGAAGACCCCCCTTGGTGCTCTTGGCTTCTTAGTAAGTGTCATTCTCATAACTAAGGTGTCCCCTGCAATCACAGGCTTCCGGAATCGCACTTTGTCTATTCCAGCGAAGAAGAAGTTATCACGAGAACCTCCCACTTCAGGTTGCAACATGACCAAACCACCGACTTGTGCCATTGCCTGCAGCAAAAGACCTCACATGCAAAGACCTGGGTCTAAGCTGCATTATGATCTTGAGCAGTTTAGTACCTCAACCATTAGAACACCAGGCATGATGGGCCTCTCTGGAAAATGTCCAGGAAAGAAGTTGTCATTTATTGTCACATTCTTTATGGCCACTGCAGAAACTCCAGGAGTGTATTCGATCACTCTATCCACCAGAAGAAAAGGAAACCTGAACAAAGAAAACGGCGCATTGGCAGCATCCGAGGAACAAAATGCAGTCGTTTTCCTCAAAGGGGGATGGGATCTGGTGTTGGGGAATTTGACAAGTGAAATTTTGGGTTTGGATGGAGCAGAAATTGGAGAAACCAAAGTGTTGGAAAGCAAAGTGTTGGAGAAAGTAGAGGCTGCCATTGGCTTTCAA	1332	0.4835	MAAATSGAVLNGLGSSFLSGGKRSQTLLATAIGGKVGVAAVSPRRLIVVAAAAPKKSWLPGVRGGGNFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMTAVLGIFVGQAWSGVPWFEAGADPNAIAPFSFGTLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSRTAENFSNATGEQGYPGGKFFDPLSFAGTIQNGVYIPDIDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGFLVSVILITKVSPAITGFRNRTLSIPAKKKLSREPPTSGCNMTKPPTCAIACSKRPHMQRPGSKLHYDLEQFSTSTIRTPGMMGLSGKCPGKKLSFIVTFFMATAETPGVYSITLSTRRKGNLNKENGALAASEEQNAVVFLKGGWDLVLGNLTSEILGLDGAEIGETKVLESKVLEKVEAAIGFQ	444

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr17787g00002	444	SUPERFAMILY	Chlorophyll a-b binding protein	69	260	-	-
	Mupr17787g00002	444	FunFam	Chlorophyll a-b binding protein, chloroplastic	71	258	-	-
	Mupr17787g00002	444	Pfam	Chlorophyll A-B binding protein	71	247	IPR022796	-
	Mupr17787g00002	444	Gene3D	Chlorophyll a/b binding protein domain	71	260	-	-
	Mupr17787g00002	444	PANTHER	CHLOROPHYLL A/B BINDING PROTEIN	55	258	IPR001344	GO:0009765\|GO:0016020

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr17787g00002	Mupr-Chr17787	2007	7084	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr17787g00002	1	259	Chloroplast and Mitochondria Gene Families	AT1G15820	80.769	1.29e-151	429

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr17787g00002	K08917		-	gmx:100527463	484.567