Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17779g00001 ATGGACAAGCTCCTTTTCAACTGTTTCATTGGATACTGTCTTCTTTATTCCCTCATGCTTGTGCATGGCAAACAATTTTCATGCAATGAAACCCCTTATCCCCATGTGTGCAAGCATTACATTGGCACTAGCAACACAGTATCAACCCTAGATGCTTCATCATCTTCCTTCCATGACATGACCATCAAGGTCACCATGGAGCAGGCCATTGAGGCTCATAGACTTGTCTCAAACATGGACTTGAATAATTTCAAGGACAAGAGAGCCAAGTCTGCATGGGAAGATTGTTTGGAGCTGTATGAGGATACACTTTATCAGCTGAAACGCTCAATGAACTCAAACAATCTAAATGACAGGTTGACTTGGCAAAGTGCATCCATTGCAAACCATCAAACATGCAAAAATGGTTTCACCGAATTCAACCTTCCCAATCACCTAAACTACTTCCCTTCCATGTTAAGCAACTTCTCCAAATTGCTAAGCAATTCCTTGTCCGTTAGCAAGGCTATGATGACATTGACATCATCAACACCGACCAAAGTACAAAATGGAGGGCGAAAGTTGCTTTCAGATGGCTTCCCCCTTTGGTTGTCACATACAGATAGAAGGCTTCTTCAAGAATCAACACCAAAAGCTGATGTTGTGGTGGCACAAGATGGTTCTGGGGACTATAAGAGCATCTCGGAGGGCGTGGCTGCAGCTTCTAAGCTCAGCGGGAAAGGGCGTGTTGTTGTGCACGTCAAAGCTGGCGTTTACAAAGAGAGTATCGATATCAAGAGGACAGTGAAGAACTTAATGATCATTGGAGATGGGATGGGTGCTACTATCGTTACCGGAAACGATAACGCACAGGATGGCTCCACTACTTTTCGTTCTGCTACTTTTGCGGCTTCTGGGGACGGATTCATCGCTCGGGACATGAGCTTCGAGAACAGTGCCGGACCGCAAAAGCACCAAGCGGTGGCTCTGAGGTCCGGCGCGGACCACTCAGTGTTCTATAGGTGCAGCTTTAAGGGCTACCAAGACACGTTGTACGTGTACGCCAACAGGCAATTCTACCGTGACTGCGACATATACGGAACAGTAGACTTCATTTTCGGGGACGCCGTGACGGTGCTTCAAAACTGCAACATCTACGTGAGGAGGCCGATGAGCAACCAGCAGAACACGGTGACGGCTCAAGCAAGAACGGACCCTAATGAGAACACAGGCATCATCATCCACAACTGTCGCATCACTGCGGCTGGGGACTTGAAAGCGGTGCAGGGCTCTTTCAGAACCTATCTTGGTCGCCCCTGGCAGAAGTACTCCCGCACTGTCATCATGAAGACTTCCCTTGACTCCTTGATTAACCCTGCAGGTTGGTCTCCATGGAGCGGAAACTTTGCTCTCAGCACCCTTTATTACGGCGAATATTCGAATACGGGAGCTGGTGCCGGCATAGGAGGGAGGGTGAATTGGCCAGGGTTTCGTGTCATCTCTAGTTCTGAGGCTGTCAAATTCACTGTTGGAGATTTCTTAGCTGGCGACTCATGGATTCCTGGGAGTGGCGTTCCCTTTGATGCAGAGGCTACACATTTTGCTGTACTTTGTGTCTTTCTTCTTCCCTTGTCCTTTGGACACACCCTGTTCCTTTTGTCCACCTTTGATAGATAG 1656 0.4801 MDKLLFNCFIGYCLLYSLMLVHGKQFSCNETPYPHVCKHYIGTSNTVSTLDASSSSFHDMTIKVTMEQAIEAHRLVSNMDLNNFKDKRAKSAWEDCLELYEDTLYQLKRSMNSNNLNDRLTWQSASIANHQTCKNGFTEFNLPNHLNYFPSMLSNFSKLLSNSLSVSKAMMTLTSSTPTKVQNGGRKLLSDGFPLWLSHTDRRLLQESTPKADVVVAQDGSGDYKSISEGVAAASKLSGKGRVVVHVKAGVYKESIDIKRTVKNLMIIGDGMGATIVTGNDNAQDGSTTFRSATFAASGDGFIARDMSFENSAGPQKHQAVALRSGADHSVFYRCSFKGYQDTLYVYANRQFYRDCDIYGTVDFIFGDAVTVLQNCNIYVRRPMSNQQNTVTAQARTDPNENTGIIIHNCRITAAGDLKAVQGSFRTYLGRPWQKYSRTVIMKTSLDSLINPAGWSPWSGNFALSTLYYGEYSNTGAGAGIGGRVNWPGFRVISSSEAVKFTVGDFLAGDSWIPGSGVPFDAEATHFAVLCVFLLPLSFGHTLFLLSTFDR 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17779g00001 551 Gene3D - 207 524 IPR012334 -
Mupr17779g00001 551 CDD PMEI-like_3 27 172 - -
Mupr17779g00001 551 ProSitePatterns Pectinesterase signature 2. 358 367 IPR033131 -
Mupr17779g00001 551 NCBIfam pectinesterase inhibitor domain 27 170 IPR006501 GO:0004857
Mupr17779g00001 551 FunFam Pectinesterase 25 170 - -
Mupr17779g00001 551 Pfam Plant invertase/pectin methylesterase inhibitor 27 165 IPR006501 GO:0004857
Mupr17779g00001 551 SMART PMEI_2 16 166 IPR006501 GO:0004857
Mupr17779g00001 551 FunFam Pectinesterase 207 524 - -
Mupr17779g00001 551 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 170 IPR035513 -
Mupr17779g00001 551 PANTHER PECTINESTERASE 24 514 - -
Mupr17779g00001 551 SUPERFAMILY Pectin lyase-like 209 521 IPR011050 -
Mupr17779g00001 551 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 171 IPR035513 -
Mupr17779g00001 551 Pfam Pectinesterase 213 510 IPR000070 GO:0030599|GO:0042545
Mupr17779g00001 551 ProSitePatterns Pectinesterase signature 1. 239 258 IPR018040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17779g00001 Mupr-Chr17779 826 3589 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17779g00001 27 521 Carbohydrate Esterase AT1G23200 53.143 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17779g00001 - - gmx:100775898 913.679