Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17759g00001 ATGGTGCGCTACGGTCCCGGCTTCCGATTCAATCCCACCGACGAAGAGCTGGTCATGTTCTACCTAAAGCGCCAGATGGGCAGAGGACTCGGCCAGTACGACTACATCGCCGTCGTCGACGTCTACAAGCTCGAGCCCTGGGAGCTTCCCCATTTTTCCAAGCTGAAGACTAGGGACTTGGAGTGGTACTTCTTCAGCGTGCTCGACCGCAAGTACGGAAACGGTTCCAGGACCAATCGTGCCACCGATAAGGGCTACTGGAAGACCACCGGAAACGACCGCTCCGTCTTCTACGGCGGCCGCACCGTCGGAAAGAAGAAGACCCTTGTTTACCACGAAGGGCGGGCCCCTGGCGGAAAACGCACCAACTGGGTCATGCACGAGTATAAGATGCTCGAGACGGAATTGGCACGTGTCGGAGCTGTCGGGAAAAGTGGCACTGGACCCAAGAATGGGGCCAAGTATGGTGCTCCCTTGATCGAGAAGGAGTGGGATGAGGAGGAGGAGGAGAAAGAAAAAGAGAAGGAGGTGGCTCCCTTACCTATTGCTCATGATGGTGATTTCAATGATTATATGGAAGCTGACGATCTCAATTCGAAGCTTGATTTCAGTGATATAATTCGGAGTGCTACTTTTCCATCCTCAAACTTTCATCCTGGGGAGTGTAGTAGCCATGCTGAGCATTCTCAAGTCATCAAGGATCTGGGGCCATTGGAAGGAACTTTTGGAATTTCTGGGCCTGAAAATTGCCAGCCTCTTGATGTGGCTGAGCAACAAGTTGTGGGGGAAAATTCAGTGAAAGATGGAGACAATGGTGAGCTGAGCGATATTCTGGATCTTCTGAATTTCCCTGATCCACCAAATGTTATGGATGTGGTGGATCTATACTTCAGTGCTGACGAGATTACTCCAAAGGTTGGTGATGGGTCATTCTTGGAAGCTGATGATCTTCCTATTGTGAATGAGGGTAATCCTACTGAGGCCGAACCTTTTGGGGCTGCTATGGTAAAGGAGTATCTTGCATTGCCTGATGATGATGATGATGATGTTTACAAGTACATATCTTTTGATTCTCCTCAGATTCCAGAGTGTGAAAACTCTATTCCCAATCAAGGATCACCTTTCACACAGAAGGTTATGGTTGACTCTATTTTTAAGAATGTGGAAGGAGAAATCACTCTTAATGCTGTGGCAAGCAAACACGATTCTGAAGTACAAGGAAATACAAATCCACTTGTTAAGCAGGCCTATGGATGGTTGGCCAGCATACCTGCCGCCCCTGCACATGCATTTGAGTTTCCTGCTAAGGAGATTGCTCATGGGCTTCATCCTGCAGCTCAGTCTTCCAATTCAGCTCATATAACTACAGGTATGATCAGCATAACAGACATTACTTTTAGAGGCAATGCGATAGATTGGATGATGGACAAAAATGGAGGGTTTAACGCAGTAGTACCTACTGGGTTTTCTCAATCGGATGTTAATTCTGCTGCTGCTGCTTTGATGCCTGTTTCTGGCAAGACCGCATTTGTGTTGTCACATGGCTGGATTTTCCTGACCGGTTTCTCAGTTCTTATTCTTTCACTGAGTTTCAAGATTGGAAGCATCATATTCAAAGTTCTGACTGATGGAGGCTTTCCATTATTTATTAAGTTGCACATAATCACTCTTTTCAAGTACTCAACTCCTTTCCTTTCAAACTTGACTGCATCAGAAGGAAAGACTACTACTGTCAGTACAACGTGA 1746 0.4685 MVRYGPGFRFNPTDEELVMFYLKRQMGRGLGQYDYIAVVDVYKLEPWELPHFSKLKTRDLEWYFFSVLDRKYGNGSRTNRATDKGYWKTTGNDRSVFYGGRTVGKKKTLVYHEGRAPGGKRTNWVMHEYKMLETELARVGAVGKSGTGPKNGAKYGAPLIEKEWDEEEEEKEKEKEVAPLPIAHDGDFNDYMEADDLNSKLDFSDIIRSATFPSSNFHPGECSSHAEHSQVIKDLGPLEGTFGISGPENCQPLDVAEQQVVGENSVKDGDNGELSDILDLLNFPDPPNVMDVVDLYFSADEITPKVGDGSFLEADDLPIVNEGNPTEAEPFGAAMVKEYLALPDDDDDDVYKYISFDSPQIPECENSIPNQGSPFTQKVMVDSIFKNVEGEITLNAVASKHDSEVQGNTNPLVKQAYGWLASIPAAPAHAFEFPAKEIAHGLHPAAQSSNSAHITTGMISITDITFRGNAIDWMMDKNGGFNAVVPTGFSQSDVNSAAAALMPVSGKTAFVLSHGWIFLTGFSVLILSLSFKIGSIIFKVLTDGGFPLFIKLHIITLFKYSTPFLSNLTASEGKTTTVSTT 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17759g00001 581 Gene3D NAC domain 13 177 IPR036093 GO:0003677|GO:0006355
Mupr17759g00001 581 SUPERFAMILY NAC domain 3 136 IPR036093 GO:0003677|GO:0006355
Mupr17759g00001 581 ProSiteProfiles NAC domain profile. 4 166 IPR003441 GO:0003677|GO:0006355
Mupr17759g00001 581 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 139 - -
Mupr17759g00001 581 Pfam No apical meristem (NAM) protein 6 130 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17759g00001 Mupr-Chr17759 2557 6084 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17759g00001 5 167 NAC Transcription Factor Family AT5G04410 61.272 1.01e-69 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr17759g00001 NAM 2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17759g00001 - - gmx:100808260 650.588