Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17745g00001 CGATTGAATTTTGGAGATAAACATAAACGGTCACCTCAAAGACACAACAGAGCACAGCGAAGCATCAACGACACAACAACCCAAAACAATGTTCCAGATCCTTCCACAACATTCTCTAATCTCTTCAATTATTTGCCATCACCACCCACCCTACACATGGCTTCAGAGGCAGTGGTGTCAGATATTAACTCTGTTTCCGAGCGAAACAGAGACATGTCTCTGTTTTTGCCCTTCCTCGTGGGCTTCTCGGACGCCACCCCGCCACGTGATAGCGACGACCCAGATCGCGAAACGGGGAGCAGCGAGGGTGGTCCGCGTCAAAGAATCATCCTGGTGAACCCATTCACTCAAGGCATGGTGGTTATTGACGGGGCTTCGAGCGTGGAAGCTCTGTTTCGCGAGCTCGGGGGTGGAAAAGGTGGTCGACCACCGGCTTCGAAGGAGTCCATAGATGCCATGGCGAGTGTAGAAATTGGAGAGGGGTGTGAGGGTTTGGAGTGTGTGGTTTGTTTGGAGGAGTTTGGGATTGGTGGGGTGGCAAAGGAGATGCCTTGTAAGCATAGGTTTCACCCCAATTGTATTGAGAAGTGGTTAGGGATTCATGGGTCTTGCCCTGTTTGTAGGTATGAGATGCCTGTGGAGGAGAGGGGTGGGGGGAAGAAGAGGGAGGAGGAAGGGGGAGACAGGACACGGGGTGGTGGTGATATTTGGGTTAGTTTTTCTTTCAATAGGAGGAGAGGCCAGGATCATGATCAAGCTTCTTCTGCTGATTCAAATGATGATTCTTCATCAAGTCATAGAGATGATGCTGTATAG 816 0.5037 RLNFGDKHKRSPQRHNRAQRSINDTTTQNNVPDPSTTFSNLFNYLPSPPTLHMASEAVVSDINSVSERNRDMSLFLPFLVGFSDATPPRDSDDPDRETGSSEGGPRQRIILVNPFTQGMVVIDGASSVEALFRELGGGKGGRPPASKESIDAMASVEIGEGCEGLECVVCLEEFGIGGVAKEMPCKHRFHPNCIEKWLGIHGSCPVCRYEMPVEERGGGKKREEEGGDRTRGGGDIWVSFSFNRRRGQDHDQASSADSNDDSSSSHRDDAV 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17745g00001 271 FunFam E3 ubiquitin-protein ligase RNF181 134 214 - -
Mupr17745g00001 271 Pfam Ring finger domain 166 208 IPR001841 -
Mupr17745g00001 271 MobiDBLite consensus disorder prediction 215 271 - -
Mupr17745g00001 271 SMART ring_2 167 207 IPR001841 -
Mupr17745g00001 271 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 138 214 IPR013083 -
Mupr17745g00001 271 MobiDBLite consensus disorder prediction 1 34 - -
Mupr17745g00001 271 MobiDBLite consensus disorder prediction 18 34 - -
Mupr17745g00001 271 SUPERFAMILY RING/U-box 162 213 - -
Mupr17745g00001 271 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 23 212 - -
Mupr17745g00001 271 ProSiteProfiles Zinc finger RING-type profile. 167 208 IPR001841 -
Mupr17745g00001 271 MobiDBLite consensus disorder prediction 215 231 - -
Mupr17745g00001 271 MobiDBLite consensus disorder prediction 244 271 - -
Mupr17745g00001 271 MobiDBLite consensus disorder prediction 85 107 - -
Mupr17745g00001 271 MobiDBLite consensus disorder prediction 88 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17745g00001 Mupr-Chr17745 562 1460 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17745g00001 68 259 C3H Transcription Factor Family AT1G26800 56.186 1.32e-61 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17745g00001 - - ccaj:109816232 265.388