Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17727g00001 ATGGCTAACCACCATCACCATCATCAGGCACATGACACCAACCAAAAATTCCTCTTGGACACTCTCTACTGCTCCGAAGAGCATTGGGTAGGGGAAGATGAAGCAGAGAACGAGTATAGTGATGATTACCTAAGTAGTACTAGTACCACAATAATAAACAAGTCCCCTCCTTTGTTGCTCGAAAGCGACATGTTTTGGGACGAACAACAGTTAAAAACGTTGCTGGGGAAAGAACAACACAACCCTCTAAGCACCTGTCTCCAAGGCAACCCCACGTTGGAGGTTTCTCGCAGAGAAGCCGTGGAGTGGATGCTCAAAGTGAACGCCCACTACTCCTTCTCTGCTCTCACTGCTCTTCTCGCGGTCAACTACTTTGACCGCTTCCTCTTCAGCTTCCGCTTTCAGAATGGGAAGCAGCCATGGATGACTCACCTCGCTGCCGTCGCTTGCCTCTCCCTCGCCGCTAAGGTCGAGGAGACACAAGTTCCCCTTCTCCTAGACTTCCAAGTGGAGGAGAGTAGACCCTTGTTCGAAGCCAAAACGATTAAAAGGATGGAGATTTTGGTCCTTTCCACTCTTGGGTGGAAGATGAACCCGCCAACCCCTCTCTCGTTTCTTGATTACATCACAAGAAGACTTGGGTGGAAGGATCATCTCTGCTTGGACTTCCTCAGGAGGTGCGAAGGTGTTCTTCTCTCTGTCCTTGGAGATTCGAGGTTTACGAGTTATCTACCTTCTGTGTTGGCAACTGCTACGATGATGCACGTTGCCAAAAGCGTGGAGCGAGCTGAATACCAGAGCCAGCAGGTCATTGGTATCCTCGGAATCGACAAGGAGAAGGTGAATGAGTGTTGGAAGGTGATGTTGGAATTGTGGTCAGGATACGAGAAGGGGAAGCAATGCATGAAACGCAAGTTTGGGTCCGTTCCTGGAAGCCCAAACGGCGTAATGGATGTGTCGTTTAGCTGCGATAGTTCCAATGACTCGTGGGCCGTGGCTGCTGCTTCTGTGTCTTCCTCACCGGAACCTTTGTCCAAGAAGAGTAGGACTGAAGAGCAGCTTCTACCAAACCGTTCCAACTCAGATTTTCACGCTAGCTAG 1101 0.4995 MANHHHHHQAHDTNQKFLLDTLYCSEEHWVGEDEAENEYSDDYLSSTSTTIINKSPPLLLESDMFWDEQQLKTLLGKEQHNPLSTCLQGNPTLEVSRREAVEWMLKVNAHYSFSALTALLAVNYFDRFLFSFRFQNGKQPWMTHLAAVACLSLAAKVEETQVPLLLDFQVEESRPLFEAKTIKRMEILVLSTLGWKMNPPTPLSFLDYITRRLGWKDHLCLDFLRRCEGVLLSVLGDSRFTSYLPSVLATATMMHVAKSVERAEYQSQQVIGILGIDKEKVNECWKVMLELWSGYEKGKQCMKRKFGSVPGSPNGVMDVSFSCDSSNDSWAVAAASVSSSPEPLSKKSRTEEQLLPNRSNSDFHAS 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17727g00001 366 CDD CYCLIN_AtCycD-like_rpt1 97 195 - -
Mupr17727g00001 366 PANTHER CYCLINS 36 297 IPR039361 -
Mupr17727g00001 366 SUPERFAMILY Cyclin-like 201 306 IPR036915 -
Mupr17727g00001 366 Gene3D - 199 286 - -
Mupr17727g00001 366 SMART cyclin_7 102 191 IPR013763 -
Mupr17727g00001 366 Pfam Cyclin, N-terminal domain 83 198 IPR006671 -
Mupr17727g00001 366 SUPERFAMILY Cyclin-like 66 198 IPR036915 -
Mupr17727g00001 366 ProSitePatterns Cyclins signature. 97 128 IPR006671 -
Mupr17727g00001 366 SMART Cyclin_C_2 200 325 IPR004367 -
Mupr17727g00001 366 MobiDBLite consensus disorder prediction 334 366 - -
Mupr17727g00001 366 Pfam Cyclin, C-terminal domain 200 322 IPR004367 -
Mupr17727g00001 366 CDD CYCLIN_AtCycD-like_rpt2 201 288 - -
Mupr17727g00001 366 FunFam D6-type cyclin 81 198 - -
Mupr17727g00001 366 Gene3D - 90 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17727g00001 Mupr-Chr17727 8535 10141 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17727g00001 18 365 Core Cell Cycle Gene Families AT5G67260 48.199 6.08e-91 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17727g00001 K14505 - gmx:100795892 460.685