Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17724g00001 ATTCAAGAATTAGTTGAAGCCATTGTTTTGCCCATGACCCACAAGGAGCGGTTCCAGAAGTTAGGAGTTCGTCCTCCCAAGGGAGTGCTGTTATATGGACCTCCAGGGACTGGGAAAACATTGATGGCCCGAGCCTGTGCAGCACAGACAAATGCCACTTTTCTGAAATTGGCAGGCCCTCAACTGGTCCAGTTGAATTATAGTGATTCAGCAACCTTGATGTATAATGTGGCTGATTGCAGTGAAGTAAGTGGAGACAGGGAGGTACAGCGAACAATGTTAGAATTGCTCAATCAGCTTGATGGTTTTAGTAGCGATGATCGGATTAAGATCCATTCAAGGAAGATGAATGTTCACCCCGATGTCAACTTTGAAGAACTTGCTCGGTCTACAGATGATTTCAATGGAGCACAACTGAAGGCTGTCTGTGTTGAGGCTGGCATGCTGGCTCTGCGCCGTGATGCAACTGAGGTGAACCATGAGGACTTTAATGAAGGTATTATTCAAGTCCAAGCCAAAAAGAAAGCAAGCCTGAATTACTATGCATAG 549 0.4554 IQELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQLNYSDSATLMYNVADCSEVSGDREVQRTMLELLNQLDGFSSDDRIKIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYYA 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17724g00001 182 Pfam AAA+ lid domain 121 165 IPR041569 -
Mupr17724g00001 182 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 108 175 - -
Mupr17724g00001 182 FunFam 26S protease regulatory subunit 6A 104 175 - -
Mupr17724g00001 182 Gene3D - 1 83 IPR027417 -
Mupr17724g00001 182 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 170 IPR027417 -
Mupr17724g00001 182 Gene3D - 109 182 - -
Mupr17724g00001 182 Pfam ATPase family associated with various cellular activities (AAA) 29 65 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17724g00001 Mupr-Chr17724 3828 5686 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17724g00001 3 171 Calmodulin-binding Proteins AT3G56690 26.609 3.92e-21 88.2