Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17716g00001 ATGGATCGGCGCCCGAGAAAGAGAGCGAGATTGGGCTGGGATATCCCTGAGGTCCCCAAGGCTCAGGTAGGATTGTTTTGTGGACACGATGTTGGGACTATTTCAAGCTATGCTCCTTCAAGGGGTCCCTCAGAACACACTACTAGTTCTCTATTCTTTAAGGCAGTTGCTCGAAATGGTTCTCCCCCTTGGCGAGATGATGACAAAGATGGGCATTACATATCCATAGCAAAATGGGTCTTAGAATGCTGGGACAGAGAGAGGAAGGAGATGGTTGCTATAAAAATTGTCCGTGGGATAAAGAAGTATCGAGAAGCAGCCATGATAGAAATTGAGGTGTTACAACATCTTGGGAAACATGACAAAGGAGGCAATCGTTGTGTGCAAATACGGAACTGGTTTGACTATCGTAATCATATCTGTATTGTGTTTGAGAAACTTGGACCAAGCTTATACGATTTTCTTCGGAAAAACAATTATCGCTCATTTCCCATTGATCTTGTCCGTGAGATTGGCAGACAACTATTGGAATGTATAGCATTCATGCATGATTTGCGCATGATTCATACTGACCTAAAGCCTGAGAATATTCTACTAGTTTCACCCGAGTATTTCAAGGTTCCCGATTACAAGAGTTCTTCTCGATCACCAAGTTCCTATTTCAAGAGGGTTCCCAAATCAAGTGCTATAAAGGTCATTGATTTTGGCAGCACCACTTATGAGCGAGAAGATCAGAATTACATTGTATCAACTCGTCATTATAGGGCTCCTGAAGTTATCCTTGGGCTTGGTTGGGGCTATCCATGTGATATATGGAGTGTGGGATGTATATTGGTCGAGTTGTGCACGGGCGAAGCTTTGTTTCAGACTCATGAAAATTTAGAGCATCTTGCAATGATGGAAAGGGTACTTGGTCCATTACCACAGCACGTGTTGAAGAGAGTTGACCGACATGCCGAGAAGTATGTTAGAAGGGGTAGATTAGATTGGCCTGAGGGTGCAACCTCAAGGGAGAGTATCAAAGCTGTAATAAAGCTTCCTAGGCTACAGAACCTTGTAATGCAACATGTAGATCATTCAGCTGGCGATCTCATACATCTCTTGCAGGGGTTACTTAGATATGACCCCTCTGAGAGACTTACAGCCAAGGAAGCTCTTAGACATTCCTTCTTTATGAGAGATCACTTTAGGAGATAA 1197 0.4336 MDRRPRKRARLGWDIPEVPKAQVGLFCGHDVGTISSYAPSRGPSEHTTSSLFFKAVARNGSPPWRDDDKDGHYISIAKWVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQHLGKHDKGGNRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECIAFMHDLRMIHTDLKPENILLVSPEYFKVPDYKSSSRSPSSYFKRVPKSSAIKVIDFGSTTYEREDQNYIVSTRHYRAPEVILGLGWGYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHVLKRVDRHAEKYVRRGRLDWPEGATSRESIKAVIKLPRLQNLVMQHVDHSAGDLIHLLQGLLRYDPSERLTAKEALRHSFFMRDHFRR 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17716g00001 398 Gene3D Transferase(Phosphotransferase) domain 1 120 391 - -
Mupr17716g00001 398 Pfam Protein kinase domain 80 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr17716g00001 398 SMART serkin_6 80 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr17716g00001 398 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 2 394 - -
Mupr17716g00001 398 CDD PKc_CLK 80 391 - -
Mupr17716g00001 398 ProSiteProfiles Protein kinase domain profile. 53 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr17716g00001 398 FunFam Serine/threonine-protein kinase AFC2 142 391 - -
Mupr17716g00001 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Mupr17716g00001 398 Gene3D Phosphorylase Kinase; domain 1 80 146 - -
Mupr17716g00001 398 SUPERFAMILY Protein kinase-like (PK-like) 80 395 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17716g00001 Mupr-Chr17716 4080 7592 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17716g00001 79 395 MAP Kinase Gene Family AT4G11330 27.829 6.45e-22 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Mupr17716g00001 Pkinase 4.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17716g00001 K08287 - gmx:100804452 764.607