Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17708g00002 ATGACTAGTTTTCAGTTTCACTTGAGAGTTTTGAGTTTGCTGATTTCAGTTTCCTATTTGCTAACATGCTTTGGGAACAATGACGTGCCTGTCCAGTTGAATGATGATGTTCTTGGCCTGATTGTGTTCAAATCAGACCTTCACGACCCTTCTTCTTATCTTGCTTCATGGAATGAAGATGATGTCAATCCATGTTCGTGGCAGTTTGTGCAGTGCAATCCTGAGAGTGGAAGAGTTTCTGAGGTCTCATTGGATGGCTTGGCCCTATCAGGGAAGATAGGAAGAGGGCTTGAGAAGTTGCAGCATCTAACGGTATTGTCCCTTTCTCACAACAACTTGAGTGGGAGTATTAATCCATCACTTACTCTCTCCAATAGTCTTGAGAGGCTCAACCTTAGTCACAATGCTCTTTCTGGTCTCATACCTACTTCTTTTGTGAATATGAATTCAGTAAAATTTCTTGATCTTTCCGACAATTCTTTCTCAGGACCAATCCCTGAGAGTTTTTTTGAGAGCTGTTCTTCCCTTCATCACATTTCTCTAGCTAGGAACATGTTTGATGGACCAATTCCTGGCTCACTCTCTAGGTGTTCCTCATTGAATAGCTTTAATCTTTCCAATAATCGTTTCTCTGGTAATGTGGACTTTAGTGGGATTTGGTCACTGAACAGGCTTAGGACTTTGGATCTATCCAACAATGCCTTATCTGGGTCCTTACCAAATGGAATTTCAGCCATACATAACTTGAAGGATATCTTATTACAAGGTAACCAGTTTTCAGGTCCATTATCCACTGATATTGGATTCTGCCTGCATCTGAGTAGGTTGGATTTTAGTGGTAATCAGTTCAGTGGAGAACTACCTGAGTCAATTGGGAGGCTTAGTTCTTTGAGCTATTTCAAGGCTTCAAACAATATTTTCACCAGTAAGTTCCCTCAATGGATTGGTAACATGACCAGTCTGGAATACCTTGAGCTCTCAAACAATCAGTTCACCGGAAGCATCCCATGGTCAATAGGGGAACTGAAATCACTGACTCATTTAAGCATTTCAAATAACAAGCTTATTGGAACTATTCCATCATCATTAAGTTCCTGCACAAAGTTATCTGTGATCCAGCTCAGAGGCAATGCTTTCAATGGCACCATTCCAGAGGGTTTGTTTGGCCTAGGATTGGAGGAAATAGACTTGTCCCATAATGAATTGGGAGGCTCAATTCCTGCAGGTTCAAGCAGGCTCTTGGAAACTCTCACTAATTTGGATCTTTCAGATAACCACCTCCAAGGGAATATCCCTGCAGAAACTGGCCTTCTTTCAAAACTAAGATACTTGAACCTGTCTTGGAATGATCTTCATTCACAGATGCCTCCAGAGTTTGGTCTCCTTCCGAACCTAACAGTTTTGGATCTTCGCAACAGTGCGTTGCACGGTTCAATTCCAGCAGATATATGTGATTCAGGCAATTTAGCTGTCCTCCAACTAGATGGAAATTCAATTGAGGGGTTTATTCCAGAGGAGATTGGGAATTGTAGCTCTCTTTACTTGCTGAGTTTGTCTCACAATAATTTGACTGGTTCAATTCCAAAGTCCATGTCAAAGCTAAACAAGCTGAAAATCCTTAAACTGGAATTCAATGAACTAAGTGGAGAGATACCGATGGAGCTTGGAATGCTTCAAAATCTTCTTGCTGTGAACATATCATATAACAGGCTCACAGGCAGGCTTCCTACAGGTAGCATATTTCAGAACTTGGACAAAAGTTCCTTGGAAGGAAACCTGGGTCTTTGCTCACCCTTGTTGAAGGGCCCATGTAAGATGAATGTCCCCAAGCCACTAGTGCTTGATCCAAATGCCTACAACAATCAAATAGGTCCCCAAAGGCAAAGAAATGAATCATCAGTGTCCGGCCCGGTTCATCGCCACAGGTTCCTTAGTGTATCTGCTATTGTAGCAATATCTGCATCCTTTGTCATTGTATTAGGAGTGATTGCTGTTAGCCTACTTAATGTTTCTGTCCGGAGAAGGCTAACATTTGTAGATAATGCATTGGAAAGTATGTGCTCAAGTTCTTCAAGATCAGGAAGTCCAGCCACAGGAAAGCTTATTCTGTTTGATTCCCAGTCCTCACCTGATTGGATCAGCAATCCCGAGTCCTTGCTAAACAAGGCATCTGAGATTGGAGAAGGAGTCTTTGGAACACTGTACAAGGTTCCATTGGGATCACAAGGTAGAATGGTGGCAATCAAGAAGCTTATATCCTCAAACATAATCCAATATCCAGAAGACTTTGATAGGGAAGTTAGAATCCTAGGGAAAGCAAGGCACCCTAATCTAATAGCATTGAAAGGATACTATTGGACTCCTCAATTACAGCTTTTAGTAACTGAGTATGCACCAAATGGTAGCTTGCAAACAAAGCTACATGAAAGGCTTCCTTCAAGTCCTCCTCTTTCTTGGGCTATAAGGTTTAAAATTTTGCTTGGAACAGCAAAGGGGCTTGCCCATTTGCACCATTCTTTCCGTCCACCAATTATCCACTACAACATAAAGCCAAGTAACATTTTGCTTGATGAAAATCACAACCCCAAGATCTCGGATTTCGGGTTGGCTCGGCTTCTGACAAAACTGGACAGGCATGTGATGAGCAATAGGTTTCAGAGCGCATTAGGATATGTGGCACCAGAGTTAGCATGCCAGAGCTTAAGGGTGAATGAGAAATGTGATGTGTATGGCTTTGGTGTGATGATCCTTGAGTTGGTGACAGGTAGGAGGCCAGTGGAGTATGGAGAAGATAATGTGCTCATACTGAATGACCATGTAAGGGTGTTGCTTGAGCAAGGTAATGTGTTGGACTGTGTGGATCAAAGCATGAGTGAGTATCCAGAAGATGAGGTATTGCCTGTTCTGAAGCTAGCAATGGTATGCACCTCTCAAATTCCCTCGAGCAGGCCTACTATGGCTGAAGTGGTGCAAATACTGCAGGTCATTAAAACCCCAGTTCCTCAAAGGATGGAA 3015 0.4242 MTSFQFHLRVLSLLISVSYLLTCFGNNDVPVQLNDDVLGLIVFKSDLHDPSSYLASWNEDDVNPCSWQFVQCNPESGRVSEVSLDGLALSGKIGRGLEKLQHLTVLSLSHNNLSGSINPSLTLSNSLERLNLSHNALSGLIPTSFVNMNSVKFLDLSDNSFSGPIPESFFESCSSLHHISLARNMFDGPIPGSLSRCSSLNSFNLSNNRFSGNVDFSGIWSLNRLRTLDLSNNALSGSLPNGISAIHNLKDILLQGNQFSGPLSTDIGFCLHLSRLDFSGNQFSGELPESIGRLSSLSYFKASNNIFTSKFPQWIGNMTSLEYLELSNNQFTGSIPWSIGELKSLTHLSISNNKLIGTIPSSLSSCTKLSVIQLRGNAFNGTIPEGLFGLGLEEIDLSHNELGGSIPAGSSRLLETLTNLDLSDNHLQGNIPAETGLLSKLRYLNLSWNDLHSQMPPEFGLLPNLTVLDLRNSALHGSIPADICDSGNLAVLQLDGNSIEGFIPEEIGNCSSLYLLSLSHNNLTGSIPKSMSKLNKLKILKLEFNELSGEIPMELGMLQNLLAVNISYNRLTGRLPTGSIFQNLDKSSLEGNLGLCSPLLKGPCKMNVPKPLVLDPNAYNNQIGPQRQRNESSVSGPVHRHRFLSVSAIVAISASFVIVLGVIAVSLLNVSVRRRLTFVDNALESMCSSSSRSGSPATGKLILFDSQSSPDWISNPESLLNKASEIGEGVFGTLYKVPLGSQGRMVAIKKLISSNIIQYPEDFDREVRILGKARHPNLIALKGYYWTPQLQLLVTEYAPNGSLQTKLHERLPSSPPLSWAIRFKILLGTAKGLAHLHHSFRPPIIHYNIKPSNILLDENHNPKISDFGLARLLTKLDRHVMSNRFQSALGYVAPELACQSLRVNEKCDVYGFGVMILELVTGRRPVEYGEDNVLILNDHVRVLLEQGNVLDCVDQSMSEYPEDEVLPVLKLAMVCTSQIPSSRPTMAEVVQILQVIKTPVPQRME 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17708g00002 1005 CDD STKc_IRAK 726 994 - -
Mupr17708g00002 1005 Gene3D Transferase(Phosphotransferase) domain 1 802 1003 - -
Mupr17708g00002 1005 Gene3D Ribonuclease Inhibitor 341 610 IPR032675 -
Mupr17708g00002 1005 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 798 1002 - -
Mupr17708g00002 1005 SUPERFAMILY Protein kinase-like (PK-like) 723 999 IPR011009 -
Mupr17708g00002 1005 ProSitePatterns Protein kinases ATP-binding region signature. 726 750 IPR017441 GO:0005524
Mupr17708g00002 1005 Pfam Leucine rich repeat 102 160 IPR001611 GO:0005515
Mupr17708g00002 1005 Pfam Leucine rich repeat 488 547 IPR001611 GO:0005515
Mupr17708g00002 1005 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 714 797 - -
Mupr17708g00002 1005 Pfam Protein kinase domain 722 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr17708g00002 1005 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 194 288 - -
Mupr17708g00002 1005 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 33 193 - -
Mupr17708g00002 1005 SUPERFAMILY L domain-like 50 387 - -
Mupr17708g00002 1005 Gene3D Ribonuclease Inhibitor 37 148 IPR032675 -
Mupr17708g00002 1005 Gene3D Ribonuclease Inhibitor 271 340 IPR032675 -
Mupr17708g00002 1005 Gene3D Ribonuclease Inhibitor 149 217 IPR032675 -
Mupr17708g00002 1005 Gene3D Ribonuclease Inhibitor 218 270 IPR032675 -
Mupr17708g00002 1005 ProSiteProfiles Leucine-rich repeat profile. 416 438 IPR001611 GO:0005515
Mupr17708g00002 1005 ProSiteProfiles Leucine-rich repeat profile. 102 124 IPR001611 GO:0005515
Mupr17708g00002 1005 Pfam Leucine Rich repeats (2 copies) 319 360 IPR025875 -
Mupr17708g00002 1005 PRINTS Leucine-rich repeat signature 127 140 - -
Mupr17708g00002 1005 PRINTS Leucine-rich repeat signature 222 235 - -
Mupr17708g00002 1005 SUPERFAMILY L domain-like 317 589 - -
Mupr17708g00002 1005 ProSiteProfiles Protein kinase domain profile. 720 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr17708g00002 1005 SMART LRR_typ_2 126 147 IPR003591 -
Mupr17708g00002 1005 SMART LRR_typ_2 148 172 IPR003591 -
Mupr17708g00002 1005 SMART LRR_typ_2 438 461 IPR003591 -
Mupr17708g00002 1005 SMART LRR_typ_2 342 366 IPR003591 -
Mupr17708g00002 1005 SMART LRR_typ_2 100 125 IPR003591 -
Mupr17708g00002 1005 SMART LRR_typ_2 558 583 IPR003591 -
Mupr17708g00002 1005 SMART LRR_typ_2 222 246 IPR003591 -
Mupr17708g00002 1005 SMART LRR_typ_2 462 486 IPR003591 -
Mupr17708g00002 1005 SMART LRR_typ_2 318 341 IPR003591 -
Mupr17708g00002 1005 Gene3D Phosphorylase Kinase; domain 1 720 801 - -
Mupr17708g00002 1005 Pfam Leucine Rich Repeat 440 463 IPR001611 GO:0005515
Mupr17708g00002 1005 Pfam Leucine Rich Repeat 224 244 IPR001611 GO:0005515
Mupr17708g00002 1005 PANTHER LEUCINE RICH REPEAT KINASE 2 294 998 - -
Mupr17708g00002 1005 FunFam Inactive leucine-rich repeat receptor-like protein kinase 314 607 - -
Mupr17708g00002 1005 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17708g00002 Mupr-Chr17708 20507 23606 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17708g00002 11 1004 Receptor kinase-like Gene Family AT3G28040 63.944 0.0 1253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Mupr17708g00002 Pkinase 7.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17708g00002 - - gmx:100813764 1841.62