Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17707g00001 ATGGCTGGTGCCACAAATTGGCTTACGTTTTCGTTGACTCCCATGGAAATGTTAAGATCCCCCGACTCGCAGTTTGTTTCATATGACACCTCTTCTCACTGCTTCGTCGATAATTTTTATGCCAACAATGGGTGGGCAAATTCCAAGGGCTTGATGGATTCACAGAGTGAGAACCAACCACTTGCGGTGCCGAAAATGGAAGATTTTTTTGACAACAAAATGGAGACTCAAGACAATTCTTCGCTGACCCAAATTTACGATCAAGGCTCTGCCTCTGTATACTTCAGCGACCAGCAAGATCTGAAAGCGATTCCTGGGTTTCAAGCGTTCTCTGCGACCAACTCGGGCTCCGAGTTGGATGACTCAGCCTCCAACAAGACTCGGGTTGCACCCGGCGAGTTAGGTGCTCATAACTCGGTCGAGTCTTGCAAAGGAGCTTTGTCTTTGTGTGATGTCGCGCACGGTTCTGAGGATAAGGCCATCGTTGCTGCGGAATTTGATAACCCGAAGAAGGTTGCACATACCTTTGGCCAGCGAACATCAATATACAGAGGGGTCACAAGACACCGATGGACGGGTAGATATGAAGCGCATCTGTGGGATAACAGCTGTAGACGAGAGGGTCAGGCCAGGAAAGGGCGTCAAGGTGGATATGACAAGGAAGAAAAGGCTGCGAGAGCTTATGATTTAGCAGCTCTGAAGTACTGGGGACCAACAGCTACCACTAACTTTCCTATTGCCAATTATACGAAGGAATTGGAAGAGATGAAACATGCAGGAAAGCAGGAATTTATTGCATCACTGCGAAGGTATGCCTATGCTGGCCAATTATACGTATTTAGCACCACATGTCTATATGCTGGAACTAAAATTGTACTTGTCCTTGCAGGAAAAGTAGTGGTTTTTCAAGGGGAGCTTCCGCTTTCAGGGGTGTCACGAGGCATCATCAACAGGGTAGATGGCAAGCAAGAATTGGTCGAGTTGCGGGAAACAAAGATCTATACTTGGGAACATTTGTTGAATATTTTCGGTTCTTGCATTGTTACAGCAACTGAAGAGGAGGCAGCAGAGGCATATGATATTGCAGCCATAAAATTCAGAGGTGCAAACGCCGTAACCAATTTTGAGATGAGCAGATATGATGTGGAAGCTATATTGAATAGTTCTCTTCCAGTTGGTGGGGTAGCAAAACGCTTGAAGCTTTCACCAGAATATGAGAACAAAGCTCCTATGGCTATAAGCACTAGTCAACAACAACCTCAGTGCATAAATGTGAGTAGCAGCATCAATTTCTCAACCATTCAGCCACTTGCTTCTATACCCTTTGATTCTGCAAACACATGTTACCCCCACAACAACCTCTTCCACAATTTTCACCCCACCAATGGTGGAAGTAGCACGGCGGAGTCTGCTGCAACTGTCACCAATGCAACCTCACTGACTACTACCCTACCACCACCACCACCAGTTCCGGGGTTCTTTATATGGCCTCCTCAGTCCTATTGA 1506 0.4641 MAGATNWLTFSLTPMEMLRSPDSQFVSYDTSSHCFVDNFYANNGWANSKGLMDSQSENQPLAVPKMEDFFDNKMETQDNSSLTQIYDQGSASVYFSDQQDLKAIPGFQAFSATNSGSELDDSASNKTRVAPGELGAHNSVESCKGALSLCDVAHGSEDKAIVAAEFDNPKKVAHTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQGGYDKEEKAARAYDLAALKYWGPTATTNFPIANYTKELEEMKHAGKQEFIASLRRYAYAGQLYVFSTTCLYAGTKIVLVLAGKVVVFQGELPLSGVSRGIINRVDGKQELVELRETKIYTWEHLLNIFGSCIVTATEEEAAEAYDIAAIKFRGANAVTNFEMSRYDVEAILNSSLPVGGVAKRLKLSPEYENKAPMAISTSQQQPQCINVSSSINFSTIQPLASIPFDSANTCYPHNNLFHNFHPTNGGSSTAESAATVTNATSLTTTLPPPPPVPGFFIWPPQSY 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17707g00001 501 PRINTS Ethylene responsive element binding protein signature 183 194 IPR001471 GO:0003700|GO:0006355
Mupr17707g00001 501 PRINTS Ethylene responsive element binding protein signature 227 247 IPR001471 GO:0003700|GO:0006355
Mupr17707g00001 501 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 60 412 - -
Mupr17707g00001 501 Pfam AP2 domain 182 237 IPR001471 GO:0003700|GO:0006355
Mupr17707g00001 501 ProSiteProfiles AP2/ERF domain profile. 311 376 IPR001471 GO:0003700|GO:0006355
Mupr17707g00001 501 SUPERFAMILY DNA-binding domain 351 378 IPR016177 GO:0003677
Mupr17707g00001 501 SMART rav1_2 313 382 IPR001471 GO:0003700|GO:0006355
Mupr17707g00001 501 SMART rav1_2 182 251 IPR001471 GO:0003700|GO:0006355
Mupr17707g00001 501 ProSiteProfiles AP2/ERF domain profile. 182 245 IPR001471 GO:0003700|GO:0006355
Mupr17707g00001 501 CDD AP2 181 247 IPR001471 GO:0003700|GO:0006355
Mupr17707g00001 501 FunFam AP2-like ethylene-responsive transcription factor ANT 181 247 - -
Mupr17707g00001 501 Gene3D AP2/ERF domain 349 378 IPR036955 GO:0003700|GO:0006355
Mupr17707g00001 501 Gene3D AP2/ERF domain 182 247 IPR036955 GO:0003700|GO:0006355
Mupr17707g00001 501 SUPERFAMILY DNA-binding domain 181 246 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17707g00001 Mupr-Chr17707 5308 10092 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17707g00001 51 501 AP2-EREBP Transcription Factor Family AT5G10510 40.036 8.18e-93 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mupr17707g00001 AP2 1.8e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17707g00001 K09285 - gmx:100814405 509.99