Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17671g00002 TCACGTGCATATGAAAACCCTAGCCGCTCCCACTCTCATATTAACGTTGTTGTTCTGTCTCCGCCTAACCTACTCGCATTGCTTCTGTGCCGCTGCTACTCTCTCCCTTCTCTTCAGATTCCATTTCCAATGGCTTCGGAGAAGAAACTATCGAACCCCATGCGGGAAATCAAGGTCCAGAAGCTCGTTCTCAACATCTCCGTTGGCGAGAGTGGCGATCGTCTCACCAGAGCCGCTAAGGTGTTGGAGCAGCTTAGTGGCCAAACTCCAGTGTTTTCCAAAGCAAGGTACACTGTCCGTTCATTCGGTATCAGAAGAAATGAAAAGATTGCATGCTATGTCACTGTTAGAGGTGACAAGGCAATGCAGCTATTGGAGAGTGGGTTAAAGGTGAAGGAATATGAACTTCTGCGAAGAAACTTTAGCGACACTGGGTGTTTTGGCTTTGGTATTCAGGAGCACATTGACTTGGGAATCAAGTATGATCCTTCAACTGGTATTTATGGAATGGACTTCTTTGTTGTTTTGGAGCGCCCTGGTTACCGTGTTGGACGCCGCCGCCGGTGCAAGTCCCGTGTAGGGATCCAGCATCGTGTCACCAAGGATGATGCTATGAAGTGGTTCCAGGTGAAATACGAAGGTGTGATCCTCAACAAGTCACAGACCATTGTTTAG 675 0.4815 SRAYENPSRSHSHINVVVLSPPNLLALLLCRCYSLPSLQIPFPMASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKDDAMKWFQVKYEGVILNKSQTIV 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17671g00002 224 SUPERFAMILY RL5-like 51 216 IPR022803 -
Mupr17671g00002 224 Pfam Ribosomal protein L5 52 105 IPR031310 -
Mupr17671g00002 224 ProSitePatterns Ribosomal protein L5 signature. 82 98 IPR020929 GO:0003735|GO:0005840|GO:0006412
Mupr17671g00002 224 Gene3D - 44 220 IPR022803 -
Mupr17671g00002 224 FunFam 60S ribosomal protein L11 45 217 - -
Mupr17671g00002 224 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 38 219 IPR002132 GO:0003735|GO:0005840|GO:0006412
Mupr17671g00002 224 Pfam ribosomal L5P family C-terminus 109 207 IPR031309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17671g00002 Mupr-Chr17671 3085 6385 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17671g00002 44 224 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 95.580 2.20e-129 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17671g00002 K02868 - mus:103987828 341.273