Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17666g00001 ATGGGGGAGCCATGCCAAAAATTTTGGTTCTCTGATATGGAAATACAAGTTGATGATTTCTTTAACCAAAGCCACAAGATTGACTCAGTGGATGATGAGGATGAGATCTTTCGAGAGATCATGCATCAGGCAGCATTTTCTTCTGAAAGCAAAACTCACTCTCCCAATAATCAAAACAAATTATCAATCCAAGGTGGTTGCACAACCCTCGCCAACAACAATAAGAGTAGCAACCTTGTGATGAAGAGCAACAGCTCCTCCAACTTCATCTTCGATTCACAACATGCACCGGAGAAACCTGCCACAGCCACTTCACCAACCACGAACATTCTGTCTTTCGATGACTCCACCGTAGTAGCAGCTACCCGCCAAACCTACGGCGGAAAACAGCCCCAGTACCACAAGGAAGTAGTTGTAGGGAGTGGTGGCGCGTGTCTTCCCTCAAAAGGGGTCTCAGAAATTGAACCTAAAGCCAACCCAATAACAAAGAAAGATAGAAGCTCTGCAGAGACACTAGACCATATAATGACAGAGAGAAAAAGGAGACGGGAACTCACAGAGAGATTCATTGAACTTTCTGCCACCATACCTGGCTTGAAGAAGATTGACAAGGCCACTATACTAAGCGAAGCAATAAGTCATGTGAAACGACTTAAAGAACGTGTTAGTGAGCTAGAAGAACAATGTAAGAAGACAAGGGTAGAGTCAGTGTCATTCGTTCATCAGAGATCCCACATTGCAACTGAGAAAGGCACCACCTCTGGTGCAATGAACTCTGATGACTGCTATAGAACAAATGAAGCACTCCCTACAGTGGAAGCAAGAGTGTGCAAAAAAGATGTACTCATCCGGATTCACTGCAAGATACAAAGTGGCATTTTGCTCAAAATTTTGGACCATCTTAATAGTCTCGATCTCTCCACAATCAGCACCAGTGTAATGCCATTTGGGAGTTTAACTCTTGACATCAGCATTATTGCTCAGATGGGTGACAAATTCAACGTAACAATGAACGATCTAGTGAAAAACCTGAGACTGGCTCTCTTGGAGTCGTCTGAAGTACAACAGCGATCCATGCTA 1080 0.438 MGEPCQKFWFSDMEIQVDDFFNQSHKIDSVDDEDEIFREIMHQAAFSSESKTHSPNNQNKLSIQGGCTTLANNNKSSNLVMKSNSSSNFIFDSQHAPEKPATATSPTTNILSFDDSTVVAATRQTYGGKQPQYHKEVVVGSGGACLPSKGVSEIEPKANPITKKDRSSAETLDHIMTERKRRRELTERFIELSATIPGLKKIDKATILSEAISHVKRLKERVSELEEQCKKTRVESVSFVHQRSHIATEKGTTSGAMNSDDCYRTNEALPTVEARVCKKDVLIRIHCKIQSGILLKILDHLNSLDLSTISTSVMPFGSLTLDISIIAQMGDKFNVTMNDLVKNLRLALLESSEVQQRSML 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17666g00001 360 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 169 218 IPR011598 GO:0046983
Mupr17666g00001 360 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 173 244 IPR036638 GO:0046983
Mupr17666g00001 360 Coils Coil 208 235 - -
Mupr17666g00001 360 PANTHER BHLH TRANSCRIPTION FACTOR 41 350 - -
Mupr17666g00001 360 SMART finulus 175 224 IPR011598 GO:0046983
Mupr17666g00001 360 Gene3D - 168 239 IPR036638 GO:0046983
Mupr17666g00001 360 Pfam Helix-loop-helix DNA-binding domain 174 218 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17666g00001 Mupr-Chr17666 3118 5045 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17666g00001 157 348 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 43.229 5.33e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr17666g00001 HLH 4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17666g00001 - - gmx:100777846 508.834