Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17654g00001 ATGCAGAACGAGGAGGGAAAGATCACCGAGCTATACATTAACATTGCCCATTTGGATGATAGTGGTATCTATAATGGTCATATTTCCACATTTGCCCTCTCTGGTTTCGTCCGAGCACAGGGAGACGCTGACAGTGGACTAGATCGGTTGTGGCAGAAGAAGAAAACAGAACCTTCTCTACGACTAGAAGAATTGTGCACCAAGAGTAGTGGCGTTAATGATCTTTCAAGTGTTTGA 237 0.443 MQNEEGKITELYINIAHLDDSGIYNGHISTFALSGFVRAQGDADSGLDRLWQKKKTEPSLRLEELCTKSSGVNDLSSV 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17654g00001 78 PANTHER 40S RIBOSOMAL PROTEIN S21 13 55 IPR001931 GO:0003735|GO:0005840|GO:0006412
Mupr17654g00001 78 Pfam Ribosomal protein S21e 13 55 IPR001931 GO:0003735|GO:0005840|GO:0006412
Mupr17654g00001 78 Gene3D - 11 59 IPR038579 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17654g00001 Mupr-Chr17654 11348 12263 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17654g00001 1 57 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 56.410 1.11e-25 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17654g00001 K02971 - cave:132184721 93.9745