Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17647g00001 ATGGCCCCTAATCCAAGAGTTAAGAAGGCTTTTAGCTTTACGAGGGCCTTAGGAATTTCTGATGAGGAGGTGAAGCCAGTGTTGATAAAGCTGTTAAGAGTTTATGAAGGAAACTGGCAGCTTATTGAAGATGACAATTATCGGACACTTGTAGATGCATACTTTGATTTTGAGAAAGACAAGGTTCCTCCAAATCCCTTTTCTTTTTTAGTAACTGAAGGTAAGAGAAAAGCAAATTTCAGCTGTCATGTTGGAGAAAAACCAATACGGGAACCGCTCTTGGTAGATGATGACGACCAGGATTTATCAACCATGGACAGCTCAAGCCAGTTATGTGCAAAAAACAATAAAATATCACCAAAGATTTTTGAACAGAAGATCAATGAGCCATCTCAAACATTCATGACAGACATTAAGCCCAAAACCAGTTCATACTCATCACATACAATGTTGAGTAAGGTAGAAAAGATCTCAAATTCATCTGGTGTGGCAGCTAAAGATAGAAATTCCTATCCTGAGAAAACATCATCAGCAGGGCATTGTGGTCATTTCGAGAAAGAGCTTGTGAAGCCTAGAACTAAGAAACCTAAGATACCACTTACTTCAACGAATCATAATGGTTTATCTGATGGCTCAGACGGAAATCTTTGTCTCAAATCTCTGTCAACTCAGTGCCAGGATATGCAAAGTAAAGCTGCTATATCAGAATGCAACAATAAGATCACAGCTTATAATGGAAACATTATAATTGCTTCTTCAAGTCTAGGAGAAGTAAAAATATCGTTAAATTGTGACTCTGCCTTGGGACAACCAAACTTCAGTATTCCTAATTTGGATGTTGTTATGAAGTTCATGGACAAGAAGTACCTTACCTCTTGCAACACTAATGGGCCCCAAATTTCTATGGCAAAGCTATTAGAAGACCTTTGCCGGAGTTATCTCAAGATTGGACATCGCAAGGGATCAAATTCCAACCATGCCATTTCACAGCAACATGTTAATCAAGATGAAAGGAATTCCTTTCATTTTGTCAATGACATAGCAAAAGGTTCAGAGAAGGTGAAAATATCATTAATAGGGGAATTTGGCTGTGAGGACTTGCCAAAATTTAATTACATACCATCTAATATAATATATCAAAGTGCTATTGTAAATATTTCTTTGGCTCGGATTTCGGATGAGGGTTGCTGTTCTGATTGTTCAGGCGACTGTCTTTCCTCATCATTGCCTTGTGCATGTGCTCAGGAAACTGGTGGAGAGTTTGCTTACACTCCGCAGGGTTTGTTGAAAGAAGAATTTCTAACAGCTTGTATTTCTATGAAGAATGAACCTCAAGGTCATCATTATGTGTACTGTCAAGAGTGCCCTTTGGAGAAGTCCAAGAATGAGTACATGCCCGAACGGTGCAAGGGGCATCTGGTTAGGAAATTTATAAAGGAATGTTGGAGGAAATGTGGATGTGACATGCATTGCGGGAATCGGACAGTGCAGCGAGGTATAACATGCAAATTGCAGGTGTACTTAACTCGTGAAGGTAAAGGCTGGGGCCTTAGAACGTTAGAAGATTTACCAAAGGGAACTTTCGTATGTGAATATGTTGGAGAAATATTAACCAATATGGAGTTATACGATAGGATTATGGAGAATAGTGGCAAAGAAAGACATACATATCCTGTAACTCTTGATGCGGACTGGGGCTCAGAAAAGGGGTTAAAGGATGAGGAGGCACTATGTTTAGATGCAACAAATAATGGAAATGTTGGAAGGTTCATCAATCATAGGTAA 1785 0.3916 MAPNPRVKKAFSFTRALGISDEEVKPVLIKLLRVYEGNWQLIEDDNYRTLVDAYFDFEKDKVPPNPFSFLVTEGKRKANFSCHVGEKPIREPLLVDDDDQDLSTMDSSSQLCAKNNKISPKIFEQKINEPSQTFMTDIKPKTSSYSSHTMLSKVEKISNSSGVAAKDRNSYPEKTSSAGHCGHFEKELVKPRTKKPKIPLTSTNHNGLSDGSDGNLCLKSLSTQCQDMQSKAAISECNNKITAYNGNIIIASSSLGEVKISLNCDSALGQPNFSIPNLDVVMKFMDKKYLTSCNTNGPQISMAKLLEDLCRSYLKIGHRKGSNSNHAISQQHVNQDERNSFHFVNDIAKGSEKVKISLIGEFGCEDLPKFNYIPSNIIYQSAIVNISLARISDEGCCSDCSGDCLSSSLPCACAQETGGEFAYTPQGLLKEEFLTACISMKNEPQGHHYVYCQECPLEKSKNEYMPERCKGHLVRKFIKECWRKCGCDMHCGNRTVQRGITCKLQVYLTREGKGWGLRTLEDLPKGTFVCEYVGEILTNMELYDRIMENSGKERHTYPVTLDADWGSEKGLKDEEALCLDATNNGNVGRFINHR 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17647g00001 594 Gene3D SET domain 322 594 IPR046341 -
Mupr17647g00001 594 SMART preset_2 344 486 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mupr17647g00001 594 Pfam Pre-SET motif 347 494 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mupr17647g00001 594 ProSiteProfiles Pre-SET domain profile. 396 499 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mupr17647g00001 594 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 594 - -
Mupr17647g00001 594 Pfam Ubiquitin-binding WIYLD domain 6 56 IPR018848 -
Mupr17647g00001 594 ProSiteProfiles SET domain profile. 502 594 IPR001214 GO:0005515
Mupr17647g00001 594 Gene3D - 1 60 IPR043017 -
Mupr17647g00001 594 CDD SET_SETDB-like 368 594 - -
Mupr17647g00001 594 Pfam SET domain 514 593 IPR001214 GO:0005515
Mupr17647g00001 594 SUPERFAMILY SET domain 365 593 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17647g00001 Mupr-Chr17647 408 3715 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17647g00001 478 593 C2H2 Transcription Factor Family AT2G23740 44.444 8.58e-21 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mupr17647g00001 Pre-SET 2.2e-16 No_clan