Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17624g00001 ATGGAAAATTATAGCAATGGCAATGGCAATGGTTCGTTGAACCTTTGTAATGGTAGCGGAGACCCACTTAACTGGGGCATGGCCGCGGAAGCTATGAAAGGTAGCCACCTTGACGAGGTGAAGCGCATGGTGGAGGACTACCGTAACCCGCTGGTCATGTTACGTGGCAAGACCCTCACCGTATCTCAGGTGGCCGCGGTTGCCACCAACCACAAGGGTGGCATCACGGTGGAACTGGCTGAGGAGACCCGCCACGGTGTCAAGGCCAGCAGTGATTGGGTCATGGATAGTATGCTCAAAGGCACTGATAGCTACGGAGTCACCACGGGGTTCGGTGCAACCTCTCACAGGAGAACCAAGCAAGGTGGTGCCCTCCAATACGAACTCATCAGATTTTTGAATGCGGGCATTTTTGGTATTAGATTTGAAATCATGGAGGCCATCGCCAAGTTTTTGAACCATAACATAACTCCATGCCTTCCTCTACGTGGTACAATCACTGCATCAGGTGACTTGGTTCCTTTATCATATGTTGCTGGCCTCTTAATTGGAAGGCCAAACTCCAAGTCTATTGGACCTAAAGGACAAGTTCTTAATGCTAAAGAGGCCTTTCAACTAGCAAGAATTGATGGTGGTTTCTTTGAGTTGCAACCTAAAGAGGGTTTGGCACTAGTAAATGGCACTGCAGTGGGATCTGGCTTGGCTTCCATGGTTCTTTTTGAGGCAAACTTACTTGTCATCCTCTCAGAAGTCTTGTCTGCAATTTTTGCTGAA 774 0.4858 MENYSNGNGNGSLNLCNGSGDPLNWGMAAEAMKGSHLDEVKRMVEDYRNPLVMLRGKTLTVSQVAAVATNHKGGITVELAEETRHGVKASSDWVMDSMLKGTDSYGVTTGFGATSHRRTKQGGALQYELIRFLNAGIFGIRFEIMEAIAKFLNHNITPCLPLRGTITASGDLVPLSYVAGLLIGRPNSKSIGPKGQVLNAKEAFQLARIDGGFFELQPKEGLALVNGTAVGSGLASMVLFEANLLVILSEVLSAIFAE 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17624g00001 258 Gene3D Fumarase/aspartase (Central domain) 229 258 - -
Mupr17624g00001 258 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 164 180 IPR022313 GO:0016841
Mupr17624g00001 258 Pfam Aromatic amino acid lyase 135 258 IPR001106 -
Mupr17624g00001 258 Pfam Aromatic amino acid lyase 59 137 IPR001106 -
Mupr17624g00001 258 Gene3D - 138 228 IPR024083 -
Mupr17624g00001 258 Gene3D - 14 137 IPR024083 -
Mupr17624g00001 258 SUPERFAMILY L-aspartase-like 21 258 IPR008948 GO:0003824
Mupr17624g00001 258 Coils Coil 258 258 - -
Mupr17624g00001 258 PANTHER HISTIDINE AMMONIA-LYASE 139 258 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17624g00001 Mupr-Chr17624 2444 6017 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17624g00001 13 258 Monolignol Biosynthesis Gene Families AT3G10340 67.018 1.03e-121 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17624g00001 K10775 - gmx:100818777 439.884