Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17610g00001 ATGGCCAACCGTTGGTGGGCCGGGAACGTTGCCGTCAGGCCCAACGAGCCCAACTCCCAGCTTCACCTTAGAGACCAAGACAACGGCGGCGACAACAGCGGCGCCACCCCGACCAACAGCGGCAACAGCAACAACAACAACGTTAACGCTGTCGAGGACGACGACAACAACACAGAGCGCGACGCCGACGACCAGAACCTCAGCGGCGGGCGGCGGCCACGCGGTAGGCCACCGGGCTCGAAGAACAAGCCGAAGCCGCCGGTGGTGATAACCAAGGAGAGCCCCAACGCGCTCCGCAGCCACATCCTGGAAATCAGCGCCGGCAGCGACGTGGCCGAGTGCATTGCCACCTTCGCCACGCGCCGCCACCGCGGCGTCTCCGTGCTCAGCGGAAGCGGCGTCGTCACCAACGTCACTCTCCGGCAGCCGGCGGCTCCCGGAGGGGTGGTCACGCTGCAGGGGAGGTTTGAGATTCTGTCTCTCTCCGGTGCGTTTCTGCCGGCGCCATCGCCTCCGGAGGCCACCGGTCTGACTGTGTACCTGGCCGGAGGGCAGGGGCAGGTGGTTGGCGGCAGCGTGGTGGGGCCGCTGGTGGCGGCGGGGCCGGTAATGGTGGTGGCCGCCACTTTTGCCAACGCCACATACGAGAGGTTGCCTTTGGAGGATGAACAAGGTGAAGAAGATATGCAAGAGGTGAACGAAGGTGGTGTTGGAACCCCTCCTTCTCAGGGTGAACAACAACAACAACAACAGCAGGTTCCAATGCCTGTCTATAATTTGGTGCCCAATAACGGTGATGTCTTTTGGGGGCCTCCACCTCTTCGGGTTGGGGGAAGATGTGCTGCACTGCTTACTATCAATTTTCGAGGGAAGGGTGGCGAAACCACGAAATGTCCTTGGATCTTAGGTACTATTAGAAACAACTATGGGATTGGGGCTTAA 942 0.6125 MANRWWAGNVAVRPNEPNSQLHLRDQDNGGDNSGATPTNSGNSNNNNVNAVEDDDNNTERDADDQNLSGGRRPRGRPPGSKNKPKPPVVITKESPNALRSHILEISAGSDVAECIATFATRRHRGVSVLSGSGVVTNVTLRQPAAPGGVVTLQGRFEILSLSGAFLPAPSPPEATGLTVYLAGGQGQVVGGSVVGPLVAAGPVMVVAATFANATYERLPLEDEQGEEDMQEVNEGGVGTPPSQGEQQQQQQQVPMPVYNLVPNNGDVFWGPPPLRVGGRCAALLTINFRGKGGETTKCPWILGTIRNNYGIGA 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17610g00001 313 CDD DUF296 99 182 IPR005175 -
Mupr17610g00001 313 Pfam Plants and Prokaryotes Conserved (PCC) domain 99 211 IPR005175 -
Mupr17610g00001 313 MobiDBLite consensus disorder prediction 1 95 - -
Mupr17610g00001 313 MobiDBLite consensus disorder prediction 236 252 - -
Mupr17610g00001 313 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 42 270 IPR014476 GO:0003680
Mupr17610g00001 313 MobiDBLite consensus disorder prediction 221 252 - -
Mupr17610g00001 313 SUPERFAMILY AF0104/ALDC/Ptd012-like 95 223 - -
Mupr17610g00001 313 ProSiteProfiles PPC domain profile profile. 95 233 IPR005175 -
Mupr17610g00001 313 FunFam AT-hook motif nuclear-localized protein 98 226 - -
Mupr17610g00001 313 Gene3D - 98 231 - -
Mupr17610g00001 313 MobiDBLite consensus disorder prediction 13 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17610g00001 Mupr-Chr17610 34 2938 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17610g00001 71 263 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 67.358 1.77e-73 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17610g00001 - - aprc:113874473 338.191