Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17593g00001 ATGGCTATAAGGGTTTTATCATGGAAGTGCCACTATGTTCTTTGTTTTGTGTTTCTCATTTTGTCTTGTCTTTGCAAGGGCCAAGACTCTTCGTTGTCACCAATGAAGAACAAAGAGAAGGAAGTCATCTACTCTGTTATTCAAGGGTTTGTTGGAAAGTGGTGGAACGGTTCATATCTATATCCAGATCCTTGTGGATGGACTCCTATACAGGGTGTTTCCTGTGAGCAATATGATGATGGCTTCTGGTATGTAACTGTTGTAAACTTTGGACCAGTTTTTGACAACTCCCTCATGTGCAACCATGATGCTCAATTCCCTCAACAACTATTCAATCTCAAGCACCTAAAAGTTCTCTCACTGTCCAGTTGCTTCCTTTCTCCAACTCAAAATCCAGTTAAACTCCCTACTTCAAACTGGGACAAGTTCTCACACAGTTTGGAATCCTTAACACTTAGATCAAACCCTGGTCTTGTTGGGACCATTCCATCCACAATTGGAAGCCTTAAGAAGCTTCAATCTCTGGTACTTCTAGAAAATGGACTAACAGGTGAACTACCACAAAGTATTGGTAATTTGGTGAGGTTGAGGCAACTAGTCATGGCAGGAAACTATTTGGTGGGTGAGGTTCCAGCCAACTATGGAGGGCTTTATGAGCTTTTAATATTTGATGCAAGCAGGAATAATCTATCAGGGGTTTTGCCACCAACACTTGGACTTTTGGATTCACTTCTAAAGCTTGATTTTAGTAACAACAAGCTTGAGGGAGAGTTGCCAAGGGAGATAGGAAGGATGAATAATCTCACCTTACTTGATATCAGTCATAACAAACTTAGAGGTGGGTTGGTTAGAACACTCAAGGAAATGGTTTCCTTAAAGCATTTGGTTCTCTCCAACAACCCAATAGGGGGTGATCTCTTGGGAGTTAGGTGGGAAAATTTCCAAAACATAGAAGCATTGGACCTTTCTAACATAGGCTTGGAAGGGAGTATCCCAGAGTCCATGGCAAAAATGAAAAGGCTTAGGTTTCTGGACCTCAGCAACAACAATCTCTCTGGAAGCCTCTCTAGAAGTTTGGAAAAAGTGCCATGTCTAAGAGCACTTCATGTAAATGGAAATAACTTGAAAGGGAGACTTGACTTCTCAGAGAGGTTTTACATGAAAATGGGAGTGCGTTTTGCAGCTTGGAATAATGCAAATCTATGTTACATTGCCAAAACAACGCACCAAATGCCTTATGGAGTAAAGCCTTGTGTGCAGAACATTACTATATCTGAAGGGGTTTCAACTGTCAAGATAAGTGAAGGGAATTTCAAGAATTCCTTTGTAGTGGCCTCTTGGGGAGGTTCAGGCTGTGCCTTTTGTGGACTTTGGTGGGTTTTCACTGTAAATGGAGTTCTTTATGTTTTCATGTGGAATATAAATCCAAATATGGCTATTTTCTTCAAAGCCTCATACCCACTTTATCTTTGCTTGATTCTTTTCTTTGATGGTTCCTTTGTGAATTGTACCGAGTTTGAAGTTGGAGGTCACCATGGCTGGGTTGTCCCCTACTCAAAAGACAATGATCAAATGTACAATCACTGGGCCTCCCAAAACAGATTTAAAGCTAATGACACTCTTCGTTTCAAGTACGAGAAAGACTCGGTTATGGAGGTGACTGAAGAAGAGTATGAAAAATGTAAATCCTCTCATCCCCTGTTTTTCTCTAACAATGGTGACACTGTCTTCCAGTTTGACCGGCCAGGGTTGTTCTACTTCATTAGTGGGGTCAGTGATCACTGTGACAGAGGGCAAAAGATAATCATCAAGGTTTTGGATATAGAGTCAGCACCTTCACCCCATTCTGCAAATGAGAATGCACAAAAACCACATTCTAAAAGTGGAGTTGCTGAAATGACTCCTATCAGTATAATAACAACATTTACACTTTTTGTTCTGTCAACCTTGGTCCTGCTTGATTCTTGTGAACAGGAAGGATTGGACTTCATTATTGGTTCATGTTATTATGGGTTGGTTTATATTGGTTCCTTCTTGAGTTGGTAT 2046 0.4071 MAIRVLSWKCHYVLCFVFLILSCLCKGQDSSLSPMKNKEKEVIYSVIQGFVGKWWNGSYLYPDPCGWTPIQGVSCEQYDDGFWYVTVVNFGPVFDNSLMCNHDAQFPQQLFNLKHLKVLSLSSCFLSPTQNPVKLPTSNWDKFSHSLESLTLRSNPGLVGTIPSTIGSLKKLQSLVLLENGLTGELPQSIGNLVRLRQLVMAGNYLVGEVPANYGGLYELLIFDASRNNLSGVLPPTLGLLDSLLKLDFSNNKLEGELPREIGRMNNLTLLDISHNKLRGGLVRTLKEMVSLKHLVLSNNPIGGDLLGVRWENFQNIEALDLSNIGLEGSIPESMAKMKRLRFLDLSNNNLSGSLSRSLEKVPCLRALHVNGNNLKGRLDFSERFYMKMGVRFAAWNNANLCYIAKTTHQMPYGVKPCVQNITISEGVSTVKISEGNFKNSFVVASWGGSGCAFCGLWWVFTVNGVLYVFMWNINPNMAIFFKASYPLYLCLILFFDGSFVNCTEFEVGGHHGWVVPYSKDNDQMYNHWASQNRFKANDTLRFKYEKDSVMEVTEEEYEKCKSSHPLFFSNNGDTVFQFDRPGLFYFISGVSDHCDRGQKIIIKVLDIESAPSPHSANENAQKPHSKSGVAEMTPISIITTFTLFVLSTLVLLDSCEQEGLDFIIGSCYYGLVYIGSFLSWY 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17593g00001 682 SUPERFAMILY Cupredoxins 503 606 IPR008972 -
Mupr17593g00001 682 ProSiteProfiles Phytocyanin domain profile. 504 607 IPR003245 GO:0009055
Mupr17593g00001 682 Pfam Plastocyanin-like domain 523 599 IPR003245 GO:0009055
Mupr17593g00001 682 CDD OsENODL1_like 504 606 IPR041846 -
Mupr17593g00001 682 FunFam Early nodulin-like protein 1 503 610 - -
Mupr17593g00001 682 Gene3D Ribonuclease Inhibitor 37 210 IPR032675 -
Mupr17593g00001 682 SUPERFAMILY L domain-like 45 380 - -
Mupr17593g00001 682 FunFam Piriformospora indica-insensitive protein 2 38 210 - -
Mupr17593g00001 682 Gene3D Ribonuclease Inhibitor 211 307 IPR032675 -
Mupr17593g00001 682 Pfam Leucine rich repeat 316 375 IPR001611 GO:0005515
Mupr17593g00001 682 Pfam Leucine rich repeat 146 206 IPR001611 GO:0005515
Mupr17593g00001 682 Gene3D Ribonuclease Inhibitor 308 386 IPR032675 -
Mupr17593g00001 682 Gene3D - 503 610 IPR008972 -
Mupr17593g00001 682 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Mupr17593g00001 682 FunFam Piriformospora indica-insensitive protein 2 211 307 - -
Mupr17593g00001 682 FunFam Piriformospora indica-insensitive protein 2 308 410 - -
Mupr17593g00001 682 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 53 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17593g00001 Mupr-Chr17593 800 4658 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17593g00001 488 644 Phytocyanin Superfamily AT1G48940 47.929 1.03e-49 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17593g00001 - - gmx:100799407 813.527