Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17560g00001 ATGTTTCTAAGGTTGAAGTCATGGGTTCCATCCTCGGTGGTGAAGAAGGTATCGAGGGAAGAGGATTGGGAAGATTTGAGGAATACGGAACTTCAACGTGCGAGGTCCAAGAGAATGAAGAGCCGCAACCTCATCTACAAAAGAGCCAGGCAGTATGCAATGGAGTACGCTGAGCAGGAAAAGGAATTGATTCGGTTGAAACGTGAGGCTAAGCTGAAAGGTGGATTTTATGTGGATCCAGAGGCTAAGCTCTTGTTTATTATTCGCATTCGTGGTATTAATGCTATGCACCCCAAGACAAGGAAGATCCTGCAGCTGTTGAGATTGAGACAGATATTCAATGGTGTATTTCTCAAAGTTAACAAAGCCACAATGAACATGCTTCACAGAGTTGAGCCTTATGTGACATATGGGTATATACCCAAATCTGAAGAGTGTGAGAGAACTTATTTACAAGAGAGGGCACTGGGCAAGTATGAAATCATATCCACTGAAGATCTTATCCATGAGATCATAACTGTTGGACCTCACTTCAAGGAGGCAAACAACTTCCTTTGGCCATTTAAGCTCAAGGCTCCTTTGGGTGGCTTAAAGAAAAAGAGGAACCACTATGTTGAAGGAGGTGATGCTGGAAACAGGGAGAATTATATCAATGAGCTAATCAGGAGAATGAATTGA 678 0.4277 MFLRLKSWVPSSVVKKVSREEDWEDLRNTELQRARSKRMKSRNLIYKRARQYAMEYAEQEKELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYIPKSEECERTYLQERALGKYEIISTEDLIHEIITVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17560g00001 225 ProSitePatterns Ribosomal protein L30 signature. 103 135 IPR018038 -
Mupr17560g00001 225 Pfam Ribosomal protein L30p/L7e 85 135 IPR016082 -
Mupr17560g00001 225 Coils Coil 49 69 - -
Mupr17560g00001 225 SUPERFAMILY Ribosomal protein L30p/L7e 84 225 IPR036919 -
Mupr17560g00001 225 CDD Ribosomal_L7_archeal_euk 84 225 IPR035808 -
Mupr17560g00001 225 Gene3D - 84 225 IPR036919 -
Mupr17560g00001 225 Pfam Ribosomal L30 N-terminal domain 9 80 IPR012988 -
Mupr17560g00001 225 PANTHER 60S RIBOSOMAL PROTEIN L7 9 225 IPR039699 -
Mupr17560g00001 225 FunFam 60S ribosomal protein L7 173 225 - -
Mupr17560g00001 225 FunFam 60S ribosomal protein L7 84 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17560g00001 Mupr-Chr17560 7505 9320 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17560g00001 6 225 Cytoplasmic Ribosomal Protein Gene Family AT2G44120 68.908 6.36e-114 324