Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17553g00001 ATGTTGGTGCCTCCATGGCTTGAGCCACTCCTAAACACATCCTTTTTCAATGTCTGTCGGATTCACGGGGATGCCGCGAGGAGCGAATGTAACATGTTTTGTCTCGACTGTAACGGGGATGCGTTTTGCTTTTATTGCCGTTCCTCAAGACACAAGGATCACCAAGTCATTCAGATAAGGCGATCTTCGTATCACGATGTAGTGAGAGTGACGGAAATTCAGAAGATGTTGGACATTAGTGGAGTGCAGACATATGTGATCAACAGTGCCAGAGTTCTGTTTCTGAATGAGAGGCCTCAGCCAAAATCTGGGAAAGGGGTAGCTCACATTTGTGAGATTTGTGGAAGAAGCCTCTTGGACCCATTTCGCTTCTGTTCTTTGGGTTGTAAGGTGGTGGGAATAAAGAGAAATGGGGATGCAAGCTTGGGTTTGGATTCTAGAAATGAGGCATCGGGAATGGAGGGAATGTCAAGGAATGAAGAATTGCGTGAAGGCTCACAAGATGAGATGTACCCGGCCACGCCTCCTCCACCTGCTTCAAACGCAAGGAGAAGAAAAGGCATTCCTCATAGGGCACCTTTTGGCTCCTAA 591 0.4738 MLVPPWLEPLLNTSFFNVCRIHGDAARSECNMFCLDCNGDAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVTEIQKMLDISGVQTYVINSARVLFLNERPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKVVGIKRNGDASLGLDSRNEASGMEGMSRNEELREGSQDEMYPATPPPPASNARRRKGIPHRAPFGS 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17553g00001 196 MobiDBLite consensus disorder prediction 142 196 - -
Mupr17553g00001 196 SUPERFAMILY B-box zinc-binding domain 16 62 - -
Mupr17553g00001 196 Pfam PLATZ transcription factor 60 131 IPR006734 -
Mupr17553g00001 196 Gene3D Classic Zinc Finger 14 79 - -
Mupr17553g00001 196 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17553g00001 Mupr-Chr17553 5806 7065 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Mupr17553g00001 PLATZ 8.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17553g00001 - - gmx:100809455 374.4