Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17542g00001 ATGAGAAAGGGACAAGATCCCGGAAAGGCGTGCCAGCGTGAGAGTTCCTTCTTTGCCCTCTGGGGCTCTTGGGGTGGTTCCTCCATGTACCCCAGGCTTATACACCCCCACCAAGATATGCAACCTGCTTCCAACCTCTCTCACCCTCACAAGGGTGATCCCTGTCTCGTTCTCACTGCTGATCCTAAGCCTCGCCTTCGTTGGACTCAGGACCTCCACGAACGCTTCGTTGATGCCGTCACTCAGCTTGGCGGAGCTAGTAATTATCATCAATATCATTTTCTGACTAGGTTGTGGATGTTATCTGCAGAAGCTACACCGAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTGACTCTGTTTCATTTGAAGAGTCATCTTCAGAAATACAGGCTTGGTAAGCAATCTGGGAAAGATGTGGGTGAAGGATGCAAAGATGGTTCATATCTTTTAGAAAGCCCTGGCACTGATAACTCTTCTCCAAAGTTGCCAACTTCTGATACAAACGAGGGTTATGAAATCAAGGAGGCATTACGAGCACAGATGGAAGTGCAGAGTAAATTACATTTACAAGTGGAGGCAGAGAAGCACTTGCAGATTCGGCAAGATGCAGAGAAGAGATACATGGCCATGCTTGAAAGAGCTTGCAAGATGCTGGCTGATCAATTTATTGGTGCTACAGTTATAGACACAGACAGCCAAAAGTTTCAAGGTGTTGGAAGCAAAGCACCTAGAGGTACCTTGGTTGATCCTCTTGGTTTTTACTCCTTGCCATCTGCTGAGGTGGCTGGTGTGAATGTCCCGGAAGAAGAAATACCGCCGAATCTCCCGCCCCAAAGAGGTGATTGTTCAACTGAAAGTTGTTTAACCTCACATGAGAGTTCTGGAGGATTAAATTTAGAAGGATCTCCAGGTGGGGGGAAAAGGAGGATGCTAGGCATGGACTCTATGGCACCACCTTTGATCTGGAGTGAAGCTAAGATGAGAACTCAAGCCATCAATGTAGCTCAAGGTAATCATCCTCAAGGAATAACTAGGAATGAGCTTCAATGCATGGACGGCCATAGTGGAGAAACGAACTCTTCAAAGGGTCCATTTTAG 1104 0.4683 MRKGQDPGKACQRESSFFALWGSWGGSSMYPRLIHPHQDMQPASNLSHPHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGASNYHQYHFLTRLWMLSAEATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDVGEGCKDGSYLLESPGTDNSSPKLPTSDTNEGYEIKEALRAQMEVQSKLHLQVEAEKHLQIRQDAEKRYMAMLERACKMLADQFIGATVIDTDSQKFQGVGSKAPRGTLVDPLGFYSLPSAEVAGVNVPEEEIPPNLPPQRGDCSTESCLTSHESSGGLNLEGSPGGGKRRMLGMDSMAPPLIWSEAKMRTQAINVAQGNHPQGITRNELQCMDGHSGETNSSKGPF 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17542g00001 367 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 37 300 IPR044848 GO:0003700
Mupr17542g00001 367 MobiDBLite consensus disorder prediction 271 311 - -
Mupr17542g00001 367 MobiDBLite consensus disorder prediction 281 299 - -
Mupr17542g00001 367 SUPERFAMILY Homeodomain-like 63 135 IPR009057 -
Mupr17542g00001 367 Pfam MYB-CC type transfactor, LHEQLE motif 174 219 IPR025756 -
Mupr17542g00001 367 Gene3D - 62 136 - -
Mupr17542g00001 367 MobiDBLite consensus disorder prediction 153 168 - -
Mupr17542g00001 367 NCBIfam myb-like DNA-binding domain, SHAQKYF class 99 134 IPR006447 GO:0003677
Mupr17542g00001 367 MobiDBLite consensus disorder prediction 137 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17542g00001 Mupr-Chr17542 6212 10546 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17542g00001 52 292 G2-like Transcription Factor Family AT3G24120 45.882 2.78e-58 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr17542g00001 Myb_CC_LHEQLE 3.1e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17542g00001 - - gmx:100782369 549.28