Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17524g00001 ATGCTGCTTTTAATTAAACGCGATATATGCAATTATGCATTTCTTAATCACGGATCGGAACTCAGTTCAGATTTTCATTTGCATCTGGTTTTTGAATTGTGCTCCGCGTTCGAAGAAGACATTTGGACCGAGATTGCTAAGTTTCTGGACGGAAAATCTCTGGTGATGCTGGCAGCCACAAGCCGATGGTTCCGGCGTGCTATCATGGATGACGGTATATGGAAGTTCGTGTGCCTGAGGGATCTTCAGGTCCCACCCCCGGAACGCGTGGCATTCAAGTGGTGCAAGCTGTACACGTCAGCCTTTGATGGAAGCCACTCCTACATGTTCCGTCAACAAGAGAAACACATTGGTGAGTTCACATCATTCCTAATTTCTTTTTACATTTTTTTAAACAATGAAATTAGAGATTGGATGCGTATTGGCGCCTTTTCTTTTGATTCTTCTGTAGCCGTCCTGACAGAGAGACTGACTTTTCCGGGGAAGATACGGAAAGGGGAAACCATGGAAAAGATGTTGCGGTCTCAAGGTTGTTGCGTGCTAGACAATGTTAAATCTGGAATCTGGATAGCTGACCTGCAGCTTGTAAGATGCCCGGTTTGTGACCTCAATACGTGCGACGGAACAATGCAGACGTTAGATGCAAGGCACATAGAACTATTTCTCTATGAAGGCTACCGAAGTGGGAGCTGGGATTACCAGCTAGTAGGATCTCATGATATCAAAAAACGAGCAGATGGGGCTGCTGGCTCCATTTTTGACATTAAACACCTGGAGGATTCTTCAACGTCGGCTGTATTTGATTACAAGTCATGGATTGGGAGACCAAATGACTGGCAACCCAAGGCCATGATTGCTTTCCATGCCGTGGCTGTGAACACTAATTTACAAGAAAATGAAGTCCCAGTTGCAAGGCCAGAGCAGCAGTATGAGAAGAATAGCATAGATGAGCTTAGTGAAGATCTTCGATTAACATGGGATAGACCTAACTGCAGATATTGTGAATCACGAGAGCAATTGTGTGGGTTTGATCGAAACAACAACAATCAACTTTTCTGTTACTCCTACCAGCCAGATACTTCACGACAAGGAGTCCAAGTTTTCAGAATCATCACATTGTGCATTGCTGGACCAGCAGCCATCTTTGCTATTGTGATGGCATGCTGTGTGTGCTACAAGGACAGACTAGCCGATATTCATAACCATGCAATTGCGAGGTCTGCAGCAGCTACAATATCACCAGCACCACAAGAAAGCATTGTAAGTACGGGTCTGGATGAGTCGACGATTGAGTCTTACGAGAAGGTAGTACTTGGAGAGAGTCGACGATTGCCTGGACCCAACAATGGATGTTGTTGGATATGCTTGTCGGAGTACAGTAGCAAAGAGACAATAAGATTGATTCCTGAATGCAAACACTGCTTCCATGCTGAGTGCATAGACGAGTGGCTTCGCATCAATACCACATGCCCAGTTTGCCGCAACTCTCCCTCCCCTTCTCCTCTCCATCTTACGTCCATTAATCCCTAG 1530 0.4536 MLLLIKRDICNYAFLNHGSELSSDFHLHLVFELCSAFEEDIWTEIAKFLDGKSLVMLAATSRWFRRAIMDDGIWKFVCLRDLQVPPPERVAFKWCKLYTSAFDGSHSYMFRQQEKHIGEFTSFLISFYIFLNNEIRDWMRIGAFSFDSSVAVLTERLTFPGKIRKGETMEKMLRSQGCCVLDNVKSGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLYEGYRSGSWDYQLVGSHDIKKRADGAAGSIFDIKHLEDSSTSAVFDYKSWIGRPNDWQPKAMIAFHAVAVNTNLQENEVPVARPEQQYEKNSIDELSEDLRLTWDRPNCRYCESREQLCGFDRNNNNQLFCYSYQPDTSRQGVQVFRIITLCIAGPAAIFAIVMACCVCYKDRLADIHNHAIARSAAATISPAPQESIVSTGLDESTIESYEKVVLGESRRLPGPNNGCCWICLSEYSSKETIRLIPECKHCFHAECIDEWLRINTTCPVCRNSPSPSPLHLTSINP 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17524g00001 509 Gene3D - 19 113 - -
Mupr17524g00001 509 SMART ring_2 452 493 IPR001841 -
Mupr17524g00001 509 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 414 499 IPR013083 -
Mupr17524g00001 509 CDD RING-H2_EL5-like 451 494 - -
Mupr17524g00001 509 Pfam Ring finger domain 452 494 IPR001841 -
Mupr17524g00001 509 CDD F-box_SF 39 68 - -
Mupr17524g00001 509 Pfam Wall-associated receptor kinase C-terminal 300 355 IPR032872 -
Mupr17524g00001 509 ProSiteProfiles Zinc finger RING-type profile. 452 494 IPR001841 -
Mupr17524g00001 509 SUPERFAMILY F-box domain 39 98 IPR036047 GO:0005515
Mupr17524g00001 509 SUPERFAMILY RING/U-box 451 497 - -
Mupr17524g00001 509 PANTHER F-BOX PROTEIN RMF 34 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17524g00001 Mupr-Chr17524 1913 8247 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17524g00001 319 499 C3H Transcription Factor Family AT2G25410 45.652 3.14e-51 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17524g00001 - - rcu:8263530 533.487