Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17512g00001 ATGACTGCGCCACCGACCAAGTACACTCACCACACCAAACTAGTCCCACCCAAGCACTCATATCCCAGACTCGTCAGAATAACCGTCACAGACACCGACGCTACCGACTCCTCCAGCGACGAAGAAGAAGCCCTCCACTCCACCGGCCACCGACAGCAACCCAGAAAGTTCGTCAACCAGATATCTATCGCCACCGAGAACGACGCCGTCCTTTCCAGGAAGAGAATTCGAAACAGGAACACTGTGCCCAAAGGCAGAGCTCCAGACAACAGTCGGCGCGTGCCATCCACCAAGAAATTCCGCGGCGTAAGACAGAGGCCGTGGGGGAAATGGGCCGCGGAGATACGCGACCCGTCGCGACGCGTTCGGTTATGGTTGGGTACCTACGACACTGCCGAGGAAGCCGCCTTGGTGTACGACAACGCGGCCATTAAGCTGCGTGGACCCGACGCGCTCACCAATTTCATAACGCCACCTGCCACGTGGCAGAATAAAGACCCGCCCCCGGTGGTAAACGGTTACGCTTCCGGGGAGGAAACTCAAAACAATAACCTCTTTTCTCCCACTTCCGTTCTTCACTGTTGTTCCATGTCCGAGGAAGCTGACTCCGTAACGGCCAAAGACGATGAGTGCTCCAATAATGCCAAATCTGAGTCACCGTTTCCGATTCCGAGCGACATACAATTTGACTTCCGAGGTTGCTCGCCGGCGCCGGATGTGTTCGACAACTTCGATAACGTGCCGGAAAGCGTTTCGTTCAGCAACGATTGGCCTGGTGTGTTTCTCACTTCTTGTGAGGATTTCGGTTTCAAAACATGGCATACGGACAGAAATCGTGACTTTTTTCAAGACATCGATGATTTGTTTGTGTCAGATTCCCTTCTTGCTCTCTGA 894 0.5391 MTAPPTKYTHHTKLVPPKHSYPRLVRITVTDTDATDSSSDEEEALHSTGHRQQPRKFVNQISIATENDAVLSRKRIRNRNTVPKGRAPDNSRRVPSTKKFRGVRQRPWGKWAAEIRDPSRRVRLWLGTYDTAEEAALVYDNAAIKLRGPDALTNFITPPATWQNKDPPPVVNGYASGEETQNNNLFSPTSVLHCCSMSEEADSVTAKDDECSNNAKSESPFPIPSDIQFDFRGCSPAPDVFDNFDNVPESVSFSNDWPGVFLTSCEDFGFKTWHTDRNRDFFQDIDDLFVSDSLLAL 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17512g00001 297 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 22 216 - -
Mupr17512g00001 297 MobiDBLite consensus disorder prediction 73 105 - -
Mupr17512g00001 297 Gene3D AP2/ERF domain 98 157 IPR036955 GO:0003700|GO:0006355
Mupr17512g00001 297 FunFam Ethylene-responsive transcription factor 2 98 157 - -
Mupr17512g00001 297 SMART rav1_2 99 162 IPR001471 GO:0003700|GO:0006355
Mupr17512g00001 297 ProSiteProfiles AP2/ERF domain profile. 99 156 IPR001471 GO:0003700|GO:0006355
Mupr17512g00001 297 CDD AP2 98 155 IPR001471 GO:0003700|GO:0006355
Mupr17512g00001 297 SUPERFAMILY DNA-binding domain 99 155 IPR016177 GO:0003677
Mupr17512g00001 297 PRINTS Ethylene responsive element binding protein signature 100 111 IPR001471 GO:0003700|GO:0006355
Mupr17512g00001 297 PRINTS Ethylene responsive element binding protein signature 122 138 IPR001471 GO:0003700|GO:0006355
Mupr17512g00001 297 Pfam AP2 domain 99 148 IPR001471 GO:0003700|GO:0006355
Mupr17512g00001 297 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17512g00001 Mupr-Chr17512 9273 10166 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17512g00001 1 200 AP2-EREBP Transcription Factor Family AT4G27950 46.667 1.69e-46 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr17512g00001 AP2 1.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17512g00001 - - vra:106777252 405.216