Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17477g00001 ATGAGCATTGAGGATCCCGGCATTTCAGGCAAGCAATATATAGATGTGGTGAGTGTTGGTTCAAGCGACATAATCTCTTCTGATACTGATGTAGGCAACATATGTCTACAGACAGGTGAAGAATTTTCTGCCGAGTTCTTACGTGATCGGGTTGCCTTAAGGAGAATTCCTGTCATAACTGATGCAGACCAGCGTCTGCCAAATAGGTTTGATGTTAATATTAAAGACAATAATTATCAGCTGGTTTATGAGGATCTACAACATGTTCTTGGGCTTAGGAGAACAGACTCTGATTGTAACTCAGATTTGTCAGACATTGCTTTAACCAGAGGATACGTTGCCGAAGTTGATAACAGGGCTTATCCTAATAATTTGAACAGATACCAGTATGAACATGGCGGTTTCAGACAAGCATCAGGTACATTTTCCAGACAAGTATCAGGTAAATTTTCCGAGGGAAATAGTTGGGATCAAGTTAATTCAGGAACAAATGTTCCATCAATTTATGCCGTTGAGTCTCCTCATTCATGCCATCCTCATGGATCAGTATTCCCAGAAGGTTCTTTCTATAAGAAGATAAAGCTTCTGTGTAGTTTTGGAGGTAGAATACTACCAAGGCCAAATGACGGGAAGCTCAGATATGTGGGTGGAGAGACACGGATAATATCAATCAGGAAGAACATCACATGGGAGGAACTTATGAGGAAGACTTCTGCTATTTCCCGTCAAACTCATCTTATCAAATACCAGCTTCCTGGAGAGGATCTTGATGCTCTTATATCTGTTTGTTCCGATGAGGATCTTCATCATATGATCGAGGAGTATGAAGAGCTTGAAAGAGCTGGAGGTTCTCAACGGCTGAGGATTTTTGTCATACCTACCAATGAATGTGAGAGTCCAAGTCCCAATGAAGCAAGAGTCAATCAGCCAAGTGATGCAGATTATCATTATGTTGTTGCTGTTAATGGTATGCTGGATCCAAGTTCGCGAAATAACTCCAATGGGCTCAGTTTGGCAAGCCATGCTAGCCAGTTTGGAAATACCTCTGATTACAACAGTCCACATTTCCATAGAGACTCATCCACATCTGCATTTGTGTCAGAGATGATGGATTGCATCCCAACCTCTCCAAATTTAGCTGGCATACTTTCAAAACCTACTCCTCAATTTTTAACAGCCCTGAAGGTAGCAGGCAAGTCATTCAATCAAATGTCTCCTTTATCACCCATTATTGAACAGCCTAAAGATCCCAAAACTTCTAACGTACAGCTATTTATGGATAAACCATATAATGGTATTAATGAAAGCATTACTCCCTTTGTTATGGAAAAAATTCCACGCGACAACTCTTTGTATGTAGACAATACCAATTATGTTGATCCAGTTGCATACTATAACAATCTTGCCCAAGGGCCTACATGTGTGAATTACCATCCTAATAATCAATGTATAGTGGAGTCTGACCAGACCAGGAAGCCCAGTGAGAATCTTCATCTTCACAGACGGAACAGCAGTAATGAGTTTGTCTCTTCTGCAGCATGTAGTCTAACTGATATGATTTTTGAGAGACCCTTAGTTACCAATGAAGGTTCATATCGTTTTAACAAGATTGTCTCTCATCCCCATGAGTCATCGAGTTTATTCTCAGAGTCTGATGTTAGAGAGGGATCTCGGTACAGAATGTTGCATGCACATTCTGACTCAACTCTTACGGAGAATGATGAGAACTATAAAGTTCCCTTGCAATTTCCTCCTAGTGTAAAGAGAGACAATTTTCCATCACTGAGAAATTCAAGTTCTTTAGAAGATTGTTCAATGCAGCCTGGAGAGATAATTGATAGTAAAGAGCACTTGTCTAAGTATCAAAATTTGCCCATTTTTGGAATGACTGATAGTTTTAGGAGAGTGTCAGAAATTGGTAAAGAGAGCTTGCAACGTTCAGATAAAAGCAATGATTTCTTTGATGTTAATATTGGAGCTATGTCACCAGACAATGCCATAGATTTTAAACATTTACAGTACATCTACTCCTCACATGGTGGTTGCTCATCTTCACCAGATTTACAAAGCAGTGAATGCAATGCATCTACTGCATCATTTATCTCTTTAGAATCCACAAGAAACCTGAGGGGGCAGCCACATGGTCTACCATTAGACAGAACTTTGTCTGAGTTTTCCACGAGGAGCCAAAATTCATCAATGAACCACCAATATGTTATGTCAGAGATAAAAGACAGTCAACCATTTCTTCCTGGCTCTTTTGAGTTACAACCTGTTGAGTCCCAAACTAACACAGAGTCCATACCACCTATCTCATATATGGACATGGATTTTTCTTCGCTAAGAGAGATTGTTATCCCTGTTGAAGATCCTGCATACTACCTGCACCAAAAGGAAGAAAACACAGTCATTAAGAATCAGTCTTCTGAATATATCAATGAATTTTGTGTCAACAAGCCAGTGCCAGAATCAGTGGCTGTTGTCAGACCAATGGATTATATTTCTTCAGGTATCCAGTCATGCTTAAAAGTTGTCTCAAATGTAGATGAAGAGGCTGAAGTTGAATCTACATCTCCTGAAAAGGAAGGGATAGAATTTGATAATCCAGAATCTGAAAGTAAGCATGCAAAATCAGGCAGTGGAAACTTCAGTAAGCCTATGGGTGATAGAGCAACTGCTGAAACAGAGGCTGAAATTTATGGTTTACAGAATATTGAGAATGATGATCTTGAAGAACTGCAAGAGTTAGGGTCTGGAACATTTGGAACTGTTTATCACGGAAAGTGGAGGGGAACAGATGTTGCAATTAAGAGAATAAAAAGTAGTTGTTTCTCTGGTAGATTGTCAGAGCAAGAGCGGTTGACTAAAGATTTTTGGAGAGAGGCACAGATTCTGTCAACTCTTCACCATCCAAATGTGGTGGCATTTTATGGGGTAGTTCCAGATGGCCCAGGTGGAACATTGGCAACAGTAACAGAATACATGGTGCATGGATCACTGAGGAATGTTCTCATGAAGAAGGAGAAAGTGCTTGACCGTCGTAAAAGACTCCTAATTGCAATGGATGCAGCCTTTGGGATGGAATATTTGCATTTGAAAAATATTGTTCATTTTGATTTGAAGTGTGATAATTTACTTGTCAATTTGGGCGATCCGGAACGTCCTGTATGTAAGGTTGGAGATTTTGGCCTATCCAGAATTAAACGCAACACACTTGTTTCCGGTGGTGTCAGAGGAACCCTTCCATGGATGGCACCTGAATTACTGGATGGTAACAGTTGTAGGGTATCTGAGAAGGTTGATATTTTTTCATTTGGCATTGCAATGTGGGAAATCTTGACCGGGGAAGAACCGTATGCTAACATGCACTGTGGCGCTATCATAGGAGGTATTGTCAATAATACGCTCAGGCCTCCTATTCCTAAACGATGTGATCTGGAGTGGAAAAATCTGATGGAAGAGTGCTGGTGTCCTGATCCTGCAGCCAGGCCAACCTTCACACAAATTAAAAATAGACTTCGCAACATGTCAGCTGCACTGCCCAAAAGGAGACATAACATTGATAAATAA 3570 0.4036 MSIEDPGISGKQYIDVVSVGSSDIISSDTDVGNICLQTGEEFSAEFLRDRVALRRIPVITDADQRLPNRFDVNIKDNNYQLVYEDLQHVLGLRRTDSDCNSDLSDIALTRGYVAEVDNRAYPNNLNRYQYEHGGFRQASGTFSRQVSGKFSEGNSWDQVNSGTNVPSIYAVESPHSCHPHGSVFPEGSFYKKIKLLCSFGGRILPRPNDGKLRYVGGETRIISIRKNITWEELMRKTSAISRQTHLIKYQLPGEDLDALISVCSDEDLHHMIEEYEELERAGGSQRLRIFVIPTNECESPSPNEARVNQPSDADYHYVVAVNGMLDPSSRNNSNGLSLASHASQFGNTSDYNSPHFHRDSSTSAFVSEMMDCIPTSPNLAGILSKPTPQFLTALKVAGKSFNQMSPLSPIIEQPKDPKTSNVQLFMDKPYNGINESITPFVMEKIPRDNSLYVDNTNYVDPVAYYNNLAQGPTCVNYHPNNQCIVESDQTRKPSENLHLHRRNSSNEFVSSAACSLTDMIFERPLVTNEGSYRFNKIVSHPHESSSLFSESDVREGSRYRMLHAHSDSTLTENDENYKVPLQFPPSVKRDNFPSLRNSSSLEDCSMQPGEIIDSKEHLSKYQNLPIFGMTDSFRRVSEIGKESLQRSDKSNDFFDVNIGAMSPDNAIDFKHLQYIYSSHGGCSSSPDLQSSECNASTASFISLESTRNLRGQPHGLPLDRTLSEFSTRSQNSSMNHQYVMSEIKDSQPFLPGSFELQPVESQTNTESIPPISYMDMDFSSLREIVIPVEDPAYYLHQKEENTVIKNQSSEYINEFCVNKPVPESVAVVRPMDYISSGIQSCLKVVSNVDEEAEVESTSPEKEGIEFDNPESESKHAKSGSGNFSKPMGDRATAETEAEIYGLQNIENDDLEELQELGSGTFGTVYHGKWRGTDVAIKRIKSSCFSGRLSEQERLTKDFWREAQILSTLHHPNVVAFYGVVPDGPGGTLATVTEYMVHGSLRNVLMKKEKVLDRRKRLLIAMDAAFGMEYLHLKNIVHFDLKCDNLLVNLGDPERPVCKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLDGNSCRVSEKVDIFSFGIAMWEILTGEEPYANMHCGAIIGGIVNNTLRPPIPKRCDLEWKNLMEECWCPDPAARPTFTQIKNRLRNMSAALPKRRHNIDK 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17477g00001 1189 Pfam PB1 domain 208 292 IPR000270 GO:0005515
Mupr17477g00001 1189 SUPERFAMILY CAD & PB1 domains 208 299 - -
Mupr17477g00001 1189 MobiDBLite consensus disorder prediction 852 892 - -
Mupr17477g00001 1189 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 998 1189 - -
Mupr17477g00001 1189 ProSiteProfiles Protein kinase domain profile. 910 1180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr17477g00001 1189 SMART serkin_6 910 1179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr17477g00001 1189 Gene3D - 211 294 - -
Mupr17477g00001 1189 Gene3D Phosphorylase Kinase; domain 1 903 997 - -
Mupr17477g00001 1189 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 212 294 - -
Mupr17477g00001 1189 CDD STKc_MAP3K-like 916 1173 - -
Mupr17477g00001 1189 SMART PB1_new 207 294 IPR000270 GO:0005515
Mupr17477g00001 1189 Gene3D Transferase(Phosphotransferase) domain 1 998 1188 - -
Mupr17477g00001 1189 SUPERFAMILY Protein kinase-like (PK-like) 899 1173 IPR011009 -
Mupr17477g00001 1189 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1035 1047 IPR008271 GO:0004672|GO:0006468
Mupr17477g00001 1189 PANTHER SERINE-THREONINE PROTEIN KINASE 242 1174 - -
Mupr17477g00001 1189 ProSitePatterns Protein kinases ATP-binding region signature. 916 937 IPR017441 GO:0005524
Mupr17477g00001 1189 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 903 997 - -
Mupr17477g00001 1189 MobiDBLite consensus disorder prediction 857 874 - -
Mupr17477g00001 1189 CDD PB1_UP2 196 292 - -
Mupr17477g00001 1189 Pfam Protein tyrosine and serine/threonine kinase 912 1173 IPR001245 GO:0004672|GO:0006468
Mupr17477g00001 1189 PRINTS Tyrosine kinase catalytic domain signature 1100 1122 IPR001245 GO:0004672|GO:0006468
Mupr17477g00001 1189 PRINTS Tyrosine kinase catalytic domain signature 1029 1047 IPR001245 GO:0004672|GO:0006468
Mupr17477g00001 1189 PRINTS Tyrosine kinase catalytic domain signature 1144 1166 IPR001245 GO:0004672|GO:0006468
Mupr17477g00001 1189 PRINTS Tyrosine kinase catalytic domain signature 992 1005 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17477g00001 Mupr-Chr17477 676 7743 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17477g00001 36 340 MAP Kinase Kinase Kinase AT1G16270 41.100 2.67e-44 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Mupr17477g00001 PK_Tyr_Ser-Thr 2.1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17477g00001 - - gmx:100810711 2012.27