Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17474g00001 ATGGTGATGGTATGGGAAGATGTTACAGTTGAGCGTCTTGCAAGTTTTGGAGAAGAGAAAAAGAAGTTGCTTAATGGAATCACTGGTTTTGCTGAACCTGCTCGTATTATGGCTGTCATGGGTCCTTCTGGCTGCGGCAAAACCACCTTCCTTGACTCTCTTACTGGAAAACTTGCTGCAAATGTTGTAGTAACAGGGAACATTCTAATCAATGGGAAGAAGAAAAGCTTGTATTCAAGAGAAGTGTCCTATGTGGCTCAAGAGGAACTTTACTTGGGAACTTTGACTGTAAAAGAGACCCTCACATTCTCTGCAAACATGAGGCTTCCTTCTAAAATGACCAAAGAAGAGATAAACAAAGTGGTGGAAGAAACCATAATGGAAATGGGTCTAGAAGATTGTGCACATAATAGGATTGGAAATTGGCATTGTCGAGGTATTAGTAATGGTGAAAAGAAGAGACTTAGCATTGGCCTTGAGATTTTAACACAACCCCATGTCTTACTTCTTGATGAACCTACAAGTGGACTTGATAGTGCCTCGGCTTTCTATGTGATTCAAGCTCTATGCCACATTGCTTACAATGGAAAGATAGTTATCTTTTCCATTCACCAGCCTAGTAGTGAGATTTTTAATCTATTTGATGATTTACTTTTGCTCTCAAATGGGGAAACTATTTATTTTGGAGAAGCAAAGATGGCTCTAAAGACAACATCAAATTCAACAATGGGAATGAGAACATCAGATATTAGGAGGAAACTCATTGGGAGTTACAAAAGTTCAAAGCTAATGATCAATGCAAGGAGAAGAATTCAACAACTAAAACCCAATGAAGAGCAAGGAATTAAGCCCTACATGGGTAGCAGTACCACATGGTGGAAGCAATTATGTACATTGACCAAGCGATCTTTCCTAAACATGACCAGGGACATTGGTTACTACTGGCTGAGGATAATGTTCTACATGATGGTAGGAATCAGTATTGGCACCCTCTTTTTTCATATTGGCACAGGCAACAACTCAATATTGGCTAGAGGAAAATGTGTATCATTCATCTATGGGTTCATGATTTGTTTGTCATGTGGAGGCTTACCATTTTTCATTGAAGAATTGAAGGTGTTCTATGGTGAAAGGTCCAAAGGGCATTATGGAGAGGCTGCATTTGTAGTATCAAACATCATATCATCATTCCCTTTCCTAGTTCTAATATCACTATCCTCCGGAATAATCATCTACTTCATGGTGCAATTTCATCCGGGTTTAGCTAATTGTGCATTTTTCTGTATCAATTTATTCTGCTGCCTATCTGTTGTTGAGTGTTGCATCATGGTTGTAGCCTCAGTGGTCCCCAATGTGCTGATGGGCATAGGAACAGGAACTGGTGTAATTATCTTCATGATGATGCCCTCCCAAATATTCAGATCATTACCTGACATTCCAAAGTTCTTTTGGCGCTATCCCATGTCCTACCTTAGTTTTGCTACTTGGGCAGTGCAGGGACAATACAAGAATGACATGCTGGGGGTTGAATTTGATCCTTTGCTTCCCGGAGGTCCCAAAGTTAGTGGCGAACAAGTCTTAACATTAGTGTTTGGTGTTCCATTGGATCATGACAAATGGTGGGACTTAACAGCATTGATTACCTTATTATTAGTTCACAGATTTGTTCTTTACTTGGTGCTTCGATTTGTCAAAACATCTAAATCACCTAAGTTGTGGTTTCATGCCACGAAAAGTTTACACTTTGCAAAAAGATGTTTATTCAATAACAAGCCATCTATCTCCTCATCCAAGAAACAAGCTCAGTATCCATTATCGTCTCAAGAAGGTGCCATGTCCCCCATCCTTACAATATAA 1857 0.3963 MVMVWEDVTVERLASFGEEKKKLLNGITGFAEPARIMAVMGPSGCGKTTFLDSLTGKLAANVVVTGNILINGKKKSLYSREVSYVAQEELYLGTLTVKETLTFSANMRLPSKMTKEEINKVVEETIMEMGLEDCAHNRIGNWHCRGISNGEKKRLSIGLEILTQPHVLLLDEPTSGLDSASAFYVIQALCHIAYNGKIVIFSIHQPSSEIFNLFDDLLLLSNGETIYFGEAKMALKTTSNSTMGMRTSDIRRKLIGSYKSSKLMINARRRIQQLKPNEEQGIKPYMGSSTTWWKQLCTLTKRSFLNMTRDIGYYWLRIMFYMMVGISIGTLFFHIGTGNNSILARGKCVSFIYGFMICLSCGGLPFFIEELKVFYGERSKGHYGEAAFVVSNIISSFPFLVLISLSSGIIIYFMVQFHPGLANCAFFCINLFCCLSVVECCIMVVASVVPNVLMGIGTGTGVIIFMMMPSQIFRSLPDIPKFFWRYPMSYLSFATWAVQGQYKNDMLGVEFDPLLPGGPKVSGEQVLTLVFGVPLDHDKWWDLTALITLLLVHRFVLYLVLRFVKTSKSPKLWFHATKSLHFAKRCLFNNKPSISSSKKQAQYPLSSQEGAMSPILTI 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17474g00001 618 Pfam ABC transporter 31 175 IPR003439 GO:0005524
Mupr17474g00001 618 Pfam ABC-2 type transporter 295 500 IPR013525 GO:0016020|GO:0140359
Mupr17474g00001 618 SMART AAA_5 33 224 IPR003593 GO:0016887
Mupr17474g00001 618 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 233 IPR027417 -
Mupr17474g00001 618 Gene3D - 8 272 IPR027417 -
Mupr17474g00001 618 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 239 574 - -
Mupr17474g00001 618 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 8 247 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17474g00001 Mupr-Chr17474 2505 8007 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17474g00001 31 216 Calmodulin-binding Proteins AT2G36910 26.396 2.34e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17474g00001 K05681 - gmx:100802207 1067.76