LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr17471g00002	ATGCAGTCTAGAAGCATCATTATTGTTGTTTTTACACTACAATGGTGTCGTGCAGCACTCTCCATTGTGAACAAAATAGAAAGGGTTGGTGTTGGCGAGGTAAATATTTCTAATTTCCCTCAAAAAAGGAAGGAAGGAAGGATAGAGAGCGGTGCTAGTGTGGCAACATATATAGATGAGCATTTGTCTCAGACAACACTTGTCATCATTATTACGATGCCTTCGAATCTCATTGTTTTCTTCCTTGTCCTTCTCACCTTCCTCCCTTTGAATTCTCACTCCTCTCAAGATACCCCTCCGTGGGTGAAAGCCGGTTATTACTATTCCGGCAATGAAATTTCTGCTTCTGACATAGAAGCAACGCTTTTCACTCACCTTTTGTGCGCTTTCGCTTTCATTAACTCCACCAGCTACAACATTTTCATCAATTCTTCGGAGGAAAACAAGTTCTCCACCTTCACCAACACGGTCAAGCTCCAAAACCCCTCCGTTTCAACGCTTCTCTCTATCTGGGGTGGCAGAGAGGACTCTGCAGTCTTCTCCTCAATGCTAAACCAATCTTCTCACAGGAAATTTTTCATTGATTCTTCAATCAAAACAGCGAGGCTATACGGCTTTCACGGCATAGACCTTACTGGAGCATGGCCAAGGCAAGAAGGTTCAGAGGTTACTAATTTGGGAACCCTTTTGAAGGAGTGGCGTGCTGCAATAACTTCCGAGGCAAGAAACTCTAGCAAGACAGAGTTGTTGTTGGTGATGGCAGGTTACTACCTCAAGGCTTCAGACACCTTGAGTTACCCCTTTAATTCAATGCAGGAGAATTTGGATTGGGTGCATTTTGTGGCATATGATTACTATCTCCCTAATAAGAATAATGTCACTGGCTTTCACGCGGCTTTGTACGGTTCATCTGGTTGGGACAACACTGATTCTGGCATCAAAGAGTGGAGGAGGAGGGGGTTTAAGTCTAACAAGTTATTAATCGGGTTGCCTTATCATGGTTATGCGTGGACACTTGTGAACCCTGCAGCAAACAGTGGCGTGGGTACACCAGCATCGGGACCTGCCATTACAATGGATGGTTCCATGGCTTATAAGTTGATAAAAAGTTTCATTATAAGCTTTGGAAATGGAGTTGTTTCACATCAAAATGATACTTTTGTGGTGAACCAGTTCAGTGTTGCGTCCACTTGGGTTAATTTCGATGATGTGGAGGTAATTAGGGCCAAAGTTTCCTATGCAAAGAAAAATGGTTTACTTGGTTACAACGTGTTCCAAGTAGGCAATGACGAAAATTGGGAACTTTCAAGGGGAGCAGCTCAAGAAGTAGATGGAGATCATCATAAGAGGAGGCTGGTAATAATTGTTCTGCTTACAACTCTGGCTGTGGCGCTTCTGTTAGGAATAGTATTGTGCTATTACCATCAAGGAATGGTAGCCACTTCTACAAAAATATTATATAAATTGAGATATTTATCAGCGGAAGAAAAAGATCTCGATAGAAACGCTTCTGATCTGATAGTATTCAGTTATCTCACAATTAAAGTGGCAACAAATAACTTCTCAAAAGATAATAGGCTTGGAGAGGGTGGATTTGGCACAGTGTATAAGGTAAGATTTGGAAATTCATCTGGTAATGAAATGCTTCGCGCAAATAGAAATTGTGAATTGAAAGTTAACCCCGTTATTTTTGTGGGCAAATTACGGAAGGATCAGGAAATAGCTGTGAAAAGACTCTCAGAAACCTCAAATCAAGGCCTTGAAGAGTTCAAGAATGAGATCACACTTACAGCAAGACTACAACATGTGAATTTAGTTAGACTTCTGGGTTACTGCACAAAAAGGGATGAGAAGATTCTGATATATGAATACCTGCCAAACAAAAGCTTAGATAATTTCCTCTTTGGTCAGTTGTTACATTACTTGTCCTTATTAAATCCAAGAAAATCAATTCTTTTAGATTGGAGCAAGCGTGTCAATATCATTGAAGGTGTTACTCAAGGCCTTCTTTATCTCCAAGAGTACTCAAATTTCACTATAATCCACCGAGATCTTAAAGCTAGTAATGTTTTGTTAGATCATGAGATGAATCCAAAAATATCAGATTTTGGTATGGCTAGAATTTTTAGGAAATATGATCTTGAAGCAAACACAAGCAGGATCGTGGGAACATATGGGTATGTACCTCCTGAGTATGTGAGAAGAGGCATATACTCAACGAAGTACGATGTTTATAGTTTTGGAGTTCTCCTCTTGCAAATCATAAGTGGAAAGAGGACTTCATGTTATTATGGCACGTATGAAAATATGTCCCTTTTGGAATATGCATATGAGCTGTGGAGGGAAGGTAGAGGTGTGGAGTTTGTTGACCCTTCATTGGATGATACAACATCACCTTGTAAAATCATGAGATGCATGCAGGTGGCTCTGTTGTGCGTTCAAGAGAACTCTGAGGATAGACCTTCCATGTTGGAAGTTGATTCACTGCTGAAGAATGAAGGTGCAGCTATTGGTACTCCCAAAATGCCTGCATTTTCAGTTAAGAAACATGAAGATGAGGAAGAAACATCTCACAGTGGGATCAAACTTCATTCAATCAATGATGTAACAATTTCACAACTGGCACCAAGATGA	2634	0.4051	MQSRSIIIVVFTLQWCRAALSIVNKIERVGVGEVNISNFPQKRKEGRIESGASVATYIDEHLSQTTLVIIITMPSNLIVFFLVLLTFLPLNSHSSQDTPPWVKAGYYYSGNEISASDIEATLFTHLLCAFAFINSTSYNIFINSSEENKFSTFTNTVKLQNPSVSTLLSIWGGREDSAVFSSMLNQSSHRKFFIDSSIKTARLYGFHGIDLTGAWPRQEGSEVTNLGTLLKEWRAAITSEARNSSKTELLLVMAGYYLKASDTLSYPFNSMQENLDWVHFVAYDYYLPNKNNVTGFHAALYGSSGWDNTDSGIKEWRRRGFKSNKLLIGLPYHGYAWTLVNPAANSGVGTPASGPAITMDGSMAYKLIKSFIISFGNGVVSHQNDTFVVNQFSVASTWVNFDDVEVIRAKVSYAKKNGLLGYNVFQVGNDENWELSRGAAQEVDGDHHKRRLVIIVLLTTLAVALLLGIVLCYYHQGMVATSTKILYKLRYLSAEEKDLDRNASDLIVFSYLTIKVATNNFSKDNRLGEGGFGTVYKVRFGNSSGNEMLRANRNCELKVNPVIFVGKLRKDQEIAVKRLSETSNQGLEEFKNEITLTARLQHVNLVRLLGYCTKRDEKILIYEYLPNKSLDNFLFGQLLHYLSLLNPRKSILLDWSKRVNIIEGVTQGLLYLQEYSNFTIIHRDLKASNVLLDHEMNPKISDFGMARIFRKYDLEANTSRIVGTYGYVPPEYVRRGIYSTKYDVYSFGVLLLQIISGKRTSCYYGTYENMSLLEYAYELWREGRGVEFVDPSLDDTTSPCKIMRCMQVALLCVQENSEDRPSMLEVDSLLKNEGAAIGTPKMPAFSVKKHEDEEETSHSGIKLHSINDVTISQLAPR	877

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr17471g00002	877	SUPERFAMILY	Chitinase insertion domain	333	401	IPR029070	-
	Mupr17471g00002	877	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	414	851	-	-
	Mupr17471g00002	877	ProSiteProfiles	Protein kinase domain profile.	521	830	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr17471g00002	877	SMART	serkin_6	521	830	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr17471g00002	877	FunFam	Uncharacterized protein	625	839	-	-
	Mupr17471g00002	877	Gene3D	Glycosidases	116	431	-	-
	Mupr17471g00002	877	Gene3D	-	332	401	IPR029070	-
	Mupr17471g00002	877	SUPERFAMILY	(Trans)glycosidases	102	441	IPR017853	-
	Mupr17471g00002	877	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	680	692	IPR008271	GO:0004672\|GO:0006468
	Mupr17471g00002	877	Gene3D	Phosphorylase Kinase; domain 1	507	557	-	-
	Mupr17471g00002	877	CDD	GH18_plant_chitinase_class_V	99	436	-	-
	Mupr17471g00002	877	SUPERFAMILY	Protein kinase-like (PK-like)	505	844	IPR011009	-
	Mupr17471g00002	877	Gene3D	Phosphorylase Kinase; domain 1	561	625	-	-
	Mupr17471g00002	877	Pfam	Protein tyrosine and serine/threonine kinase	524	828	IPR001245	GO:0004672\|GO:0006468
	Mupr17471g00002	877	ProSiteProfiles	Glycosyl hydrolases family 18 (GH18) domain profile.	101	446	IPR001223	GO:0005975
	Mupr17471g00002	877	SMART	2g34	101	430	IPR011583	GO:0008061
	Mupr17471g00002	877	Gene3D	Transferase(Phosphotransferase) domain 1	626	837	-	-
	Mupr17471g00002	877	Coils	Coil	877	877	-	-
	Mupr17471g00002	877	Pfam	Glycosyl hydrolases family 18	106	430	IPR001223	GO:0005975

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr17471g00002	Mupr-Chr17471	21556	25653	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr17471g00002	509	877	Receptor kinase-like Gene Family	AT4G11530	46.400	4.05e-103	333

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Mupr17471g00002		Glyco_hydro_18	2.5e-54	CL0058

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr17471g00002	-		-	aprc:113847882	1253.04