Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17463g00001 ATGGAGTGCACCAACCCTACCTCTTCATCTTCCAAGTACTCCAACAAGAGCAAGGAGAAAAAGGGTGCCAAGAAAAGCAACAAGGGAGTGATGAGGCTTTCCACTGATCCACAAAGCGTGGCAGCCAGAGAAAGAAGGCACAGAATCAGCGACAGGTTCAAGATCCTTCAGAGCATGGTCCCTGGTGGGAGCAAGATGGACACGGTTTCCATGCTCGAGGGAGCCATTCACTACGTTGAGTTCCTCAAGACTCAGATTTGGCTTCACCAAGCGTTGATAAACTTTGTAGATGTTGATCATGACTCTCACATGCTCCTCCCCGCAGAGTATAACTTCTCTGATGAACACGCCATTTTTTCCCTTCAGCAAAACCCTTCTTCTTCTTCGGTTTCGGTGCATTCTCAGCAGAGTTTGCCACAGCTTCCACTTGCACAGTACTGCTTCCAAGATATGGCAGATTTTTCCCTCTTCCAAAGTCAGTTTGAAGTTCGATAA 495 0.4747 MECTNPTSSSSKYSNKSKEKKGAKKSNKGVMRLSTDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEGAIHYVEFLKTQIWLHQALINFVDVDHDSHMLLPAEYNFSDEHAIFSLQQNPSSSSVSVHSQQSLPQLPLAQYCFQDMADFSLFQSQFEVR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17463g00001 164 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 33 82 IPR011598 GO:0046983
Mupr17463g00001 164 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 6 140 IPR045843 GO:0003700|GO:0006355
Mupr17463g00001 164 SMART finulus 39 88 IPR011598 GO:0046983
Mupr17463g00001 164 MobiDBLite consensus disorder prediction 1 42 - -
Mupr17463g00001 164 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 38 96 IPR036638 GO:0046983
Mupr17463g00001 164 FunFam Transcription factor LAX PANICLE 36 99 - -
Mupr17463g00001 164 Gene3D - 32 90 IPR036638 GO:0046983
Mupr17463g00001 164 CDD bHLH_AtIND_like 34 93 - -
Mupr17463g00001 164 Pfam Helix-loop-helix DNA-binding domain 43 82 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17463g00001 Mupr-Chr17463 3793 5045 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17463g00001 14 88 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43175 54.667 1.47e-21 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr17463g00001 HLH 5.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17463g00001 - - gmx:113000114 187.193