Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1745g00007 ATGGATCATCAAGGGCATGGGCATGGGCAGACCCCATCAATGGGGGTTGTTGGAAGTGGAACTCAACTTCCTTATGGTTCTAATCCATACCAGGCCAGCCATATAGCAGGTTCACCTGGGATGGTTGTTGCATCACCTGGGACCCTTCAATCCACTGGTCAACCATCTGCAACTCAGTTGGCACAACAACAACTTGCTTATCAGCACATTCACCAGCAACAGCAGCAACAGCAGCAGCAATTGCAGCAACGACTTCAAGCCTTTTGGGCAAATCAATATCAAGAAATTGAGAAGGTAACTGATTTCAAGAACCACAGCCTTCCCTTGGCAAGAATCAAAAAGATTATGAAGGCTGATGAGGATGTCAGAATGATATCAGCTGAGGCACCAGTTATATTTGCAAGGGCATGTGAAATGTTCATATTGGAGTTAACATTGCGTTCTTGGAATCACACTGAAGAGAACAAAAGGAGAACCCTTCAGAAGAATGATATTGCAGCAGCCATCACAAGAACAGATATATTTGATTTCTTGGTTGACATTGTGCCTCGGGAGGACTTGAAAGATGAAGTGCTTGCATCAATGCCAAGAGGGACTGTGCCAGTTACAGGGCCTGCTGAGACACTTCCTTATTGCTATATGCCACCTCAACATCCACAGCAAGTTGGAACTGCTGGTGTTATAATGGGTAACAAGCCTTTGATGGACCCATATGCTCAACAGACTCATCCCTACAACATGACACCACAAATGTGGCCACAACCACCGGAGCATCAACAATCATCTTCAGATCAGTAG 798 0.4536 MDHQGHGHGQTPSMGVVGSGTQLPYGSNPYQASHIAGSPGMVVASPGTLQSTGQPSATQLAQQQLAYQHIHQQQQQQQQQLQQRLQAFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASMPRGTVPVTGPAETLPYCYMPPQHPQQVGTAGVIMGNKPLMDPYAQQTHPYNMTPQMWPQPPEHQQSSSDQ 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1745g00007 265 Gene3D Histone, subunit A 66 184 IPR009072 GO:0046982
Mupr1745g00007 265 FunFam Nuclear transcription factor Y subunit gamma 70 184 - -
Mupr1745g00007 265 MobiDBLite consensus disorder prediction 241 265 - -
Mupr1745g00007 265 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 73 215 - -
Mupr1745g00007 265 MobiDBLite consensus disorder prediction 1 22 - -
Mupr1745g00007 265 Pfam Core histone H2A/H2B/H3/H4 61 169 IPR007125 GO:0003677
Mupr1745g00007 265 MobiDBLite consensus disorder prediction 240 265 - -
Mupr1745g00007 265 SUPERFAMILY Histone-fold 66 178 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1745g00007 Mupr-Chr1745 58715 59512 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1745g00007 1 231 CCAAT-HAP5 Transcription Factor Family AT1G08970 63.203 2.44e-83 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mupr1745g00007 CBFD_NFYB_HMF 6e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1745g00007 K08066 - gmx:100785287 454.521