Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17403g00001 ATGAGCAGCTTAAGGCCGGAATTGCACGTTGCACAACAACTTCGTAGAGACAAATTGAGGATCCAAAACAGTTCGCAACACTTGCAAGAGTTCCCTAACAACCTAGAACACTTATCGTTACACCCGGGGTTCAACTTGGATCTCCTTCAAGTAAGAAACGTTCGAAATGGCAACATGTTGGACGAGGGCGAAGCGCTTTATTCATCGGAAATGATAACTTTTTCGACTGCTCCGAATCCTTTATCCGCTCCTAGAAACCCGTTGGAGTGTCAAGACCTAATGATGGCTCAGTACGGTTCTTCGCCTTCGTTTTCTCATTCATCCCCCAAACCCGAAAACTGCGAACCGCGCAACTTGGGTGCTAATTGGATGGTGAGTTATAACCATACCAACAGCAACAACAACAACAACACCTTCTTGCCTTCTGGCGAAATGCATTACCCTCCTTCTTCGGCTTCTTCGCCTCCACTTTTCCACAACGCGTTGCAGGATATGGCTTATGGCGTTTGGGGAGGGAATCACGGCGAGCCCGTGGGTGCGCTTCATCCTAGCTTTGGAAACAACGAGTTACGTTTTGGGAGTGCTAATTTGTGGACAAAGGTTAATGAAGTACAGGAAACAAATCCTCACCAGGGTCTATCCTTGTCCCTTTCATCAAACTCACAATCAAAGCCTTGCGTCTCTAATTTTGAAGAAGGGTCTGGAACTGCGTCAGATGTGAAATCATCCACCATGAGGGTCAACGTGCTTTCAAACAACGCTGTTTATCGAAACGTTGGTCCTCTTGGTCCTTTCACCGGGTACGCGACTATTCTCAAGAGTTCAAGGTTCTTGAGGCCTTGCCAACAGCTCTTAGACGAGTGGTGCTGTCAATCTGGTTCAAAACTTGCGAAAGGAGGGGATTGCAATGTTCCAGAGTGGGTCTCTCGAGATGTCAGTGCTGCTTCTACTTCTGATGCTGCAAAAGGTGGTGGTGCTAGCAATTCAGGTGCTTCATCCTCTGTGTTGTATACTTCAAACGAAAATCATACTAATAGCGCTGATGGCGGAGCCGCGAGTAGCTTTTGTCTTTCTTCTCGGCCAGAGTGCCAAAAGAACAAGGCCAAATTACTATTCATGCAAGAGGAGGTTACTAGGAGATACAGGCAATACCATCAACAAATGCAAATGGTTGTTCAATCGTTCGAATCAGTAGCTGGACTTAGTTGTGCTACCCCTTACGTGTCCTTGGCCCTCAAGTCAGTATCAAAACACTTCAGGTGCCTAAAAAATGCTATCTCAGATCAACTGAAGCTCACATGTGAAGTCTTGGGAGAGGACTTTTCAATACCAAGCACAAGTACTAGTGGTAAATTTGACAATAATATGGCAAGGCTAAGGTGCATGGACCAAAGCTTTCAAAAAAACAAATCTGTGGGGGCTAACATTAACTTTCTTGAGCCCCAACAACACGTATGGAGGCCCCAGAGAGGATTACCAGAACGTTCAGTGGCAATTCTTAAAGCTTGGCTATTTGAGCATTTCCTTCATCCGTACCCCACGGACACTGATAAACACATGTTGGCTACCCAAACAGGCCTATCACGAAACCAGGTATCAAACTGGTTCATAAATGCCCGAGTCCGAGTGTGGAAGCCAATGGTTGAGGAAATCCACACGCTGGAAACAAAAGGGGGAACAGAAGGGTCGGAAGGTAGAAACGAGAAGGTTGATGATGAGCAGGGTGCGAGCAGGGTGGGCCCGGAAAAGCAATTCCAGTGTTTGGAAATGGGGTCATGCTCCTCTGCAGGCAACGAGGAGCAAGAGCAATGGAACCAAGAGAAACGGTCAAAGGTGGAATGCCAGATTACAAGTGACGGGACAATGATGGGTTTTATGCCATACCGAAGGGGTGCCCTTGAGGGTCTTGGCTCCGTCTCATTAACTTTGGGTCTTAGGCACGGCGTCGAGCAACAACAGTTACAGCAAGAGGAGGAACTTAGGCGTCAGTTTGGAGGCCACATGATCCATGACTTTGTGGGTTAA 2025 0.4721 MSSLRPELHVAQQLRRDKLRIQNSSQHLQEFPNNLEHLSLHPGFNLDLLQVRNVRNGNMLDEGEALYSSEMITFSTAPNPLSAPRNPLECQDLMMAQYGSSPSFSHSSPKPENCEPRNLGANWMVSYNHTNSNNNNNTFLPSGEMHYPPSSASSPPLFHNALQDMAYGVWGGNHGEPVGALHPSFGNNELRFGSANLWTKVNEVQETNPHQGLSLSLSSNSQSKPCVSNFEEGSGTASDVKSSTMRVNVLSNNAVYRNVGPLGPFTGYATILKSSRFLRPCQQLLDEWCCQSGSKLAKGGDCNVPEWVSRDVSAASTSDAAKGGGASNSGASSSVLYTSNENHTNSADGGAASSFCLSSRPECQKNKAKLLFMQEEVTRRYRQYHQQMQMVVQSFESVAGLSCATPYVSLALKSVSKHFRCLKNAISDQLKLTCEVLGEDFSIPSTSTSGKFDNNMARLRCMDQSFQKNKSVGANINFLEPQQHVWRPQRGLPERSVAILKAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIHTLETKGGTEGSEGRNEKVDDEQGASRVGPEKQFQCLEMGSCSSAGNEEQEQWNQEKRSKVECQITSDGTMMGFMPYRRGALEGLGSVSLTLGLRHGVEQQQLQQEEELRRQFGGHMIHDFVG 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17403g00001 674 Gene3D - 489 551 - -
Mupr17403g00001 674 SMART prehox3 266 428 IPR006563 -
Mupr17403g00001 674 SMART HOX_1 486 550 IPR001356 GO:0003677
Mupr17403g00001 674 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 156 572 - -
Mupr17403g00001 674 MobiDBLite consensus disorder prediction 554 582 - -
Mupr17403g00001 674 Pfam Homeobox KN domain 503 542 IPR008422 GO:0003677|GO:0006355
Mupr17403g00001 674 CDD homeodomain 486 547 IPR001356 GO:0003677
Mupr17403g00001 674 FunFam BEL1-like homeodomain protein 9 489 551 - -
Mupr17403g00001 674 ProSiteProfiles 'Homeobox' domain profile. 483 546 IPR001356 GO:0003677
Mupr17403g00001 674 MobiDBLite consensus disorder prediction 554 578 - -
Mupr17403g00001 674 SUPERFAMILY Homeodomain-like 488 552 IPR009057 -
Mupr17403g00001 674 Pfam Associated with HOX 271 427 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17403g00001 Mupr-Chr17403 1628 7229 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17403g00001 213 556 Homeobox Transcription Factor Family AT5G02030 43.137 1.21e-72 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mupr17403g00001 POX 1.3e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17403g00001 - - vum:124831694 1022.31