Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17339g00001 AATTGCAGTGTCAAAGCAACTATTGATAGGTATAAAAAAGCATGTTCAGATTCGTCTGGTGCTGGATCTGCTTCTGAGGCTAATGCTCAGTTTTACCAGCAAGAGGCAGATAAACTTCGTGCACAAATTAGTAACCTGCAGAATAACAACAGGCAAGTTGAATTGCAAATGATGGGTGAGTCTTTGGGCTCTATGAGTGCCAAGGAACTCAAAAACCTGGAGACCAAATTAGAAAAAGGAATTAGTAGGATTCGTTCAAAAAAGAACGAGCTGCTATTTGCTGAAATTGAGTACATGCAGAAGAGGGAGATTGACTTGCACAACAACAACCAGCTTCTTCGAGCAAAGATAGCTGAAAGTGAGAGGAGCCACCATAACTTGGCTGTGATGCCGGGAGGGACAAACTATGACTCTATGCAGTCTCAGCAGCAATTTGACTCTCGTGGCTACTTCCAAGTGACTGGATTACAACCCAATAATCAGTATGCACGGCAAGATCAGATGTCCCTTCAATTAGTGCAGATGACAGACGAATTGATTGAGCCTCCAATAAATTGGTTTCATTATGCATTTGATACTAACTTGACCCACTATCAGTTTGGA 603 0.4196 NCSVKATIDRYKKACSDSSGAGSASEANAQFYQQEADKLRAQISNLQNNNRQVELQMMGESLGSMSAKELKNLETKLEKGISRIRSKKNELLFAEIEYMQKREIDLHNNNQLLRAKIAESERSHHNLAVMPGGTNYDSMQSQQQFDSRGYFQVTGLQPNNQYARQDQMSLQLVQMTDELIEPPINWFHYAFDTNLTHYQFG 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17339g00001 201 Coils Coil 70 90 - -
Mupr17339g00001 201 Coils Coil 29 56 - -
Mupr17339g00001 201 Pfam K-box region 27 117 IPR002487 GO:0003700|GO:0005634|GO:0006355
Mupr17339g00001 201 ProSiteProfiles K-box domain profile. 29 123 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17339g00001 Mupr-Chr17339 1454 5325 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17339g00001 1 173 MADS-box Gene Family AT3G58780 57.542 3.45e-59 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17339g00001 K09264 - gmx:100790650 291.197