Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17333g00001 ATGTCAGAAGGAACCAGTCTGGTGCTGGAATCATCTGAAAATGGCACAGATTTGTCACAGGATGACATTGGCACCATTGAGGAAACACCAGAGGAAACGATTTTGTCAAGACAAACTTCTGTCAACCTTGTGCCTTTTATTGGTCAACGATTTGTATCTCAAGAAGCAGCTTATGAATTTTATTGCAGTTTTGCTAAACAATGTGGCTTTTCAATTAGACGGCACCGAACTCGAGGGAAAGATGGGGTTGGCCGGGGAGTTACCAGAAGGGATTTTACTTGCCATCGGGGTGGATATCCCCAGATTAAACCTTCTGATGATGCCAAGGTGCAAAGGAACCGCAAATCATCTCGCTGTGGTTGCCAAGCATACATGCGTATTGTCAAAAGAGCTGATTTTGATGTCCCCGAATGGCGTGTTACTGGTTTTAGGAACATCCACAATCACGAGTTGTTAAAATCCAATGAGGTGCGTCTTCTTCCGGCATATTGTCCTATATCTCCTGATGACAAGAGTCGTATATGCATGTTTGCTAAAGCTGGAATGTCAGTAAGGCAAATGCTAAGATTGATGGAGCTAGAGAAAGGCATCAAACTTGGTTGTCTTCCCTTTACAGAGATAGATGTAAGAAACCTGTTGCAGTCTTTCAGAAATGTGGATAGAGATAATGATGCCATTGATTTGATTGCTATGTGCAAGAGGTTAAAGGATGAAAACCACGACTTCAAGTATGAATTCAAGATAGATAACAATAACAGGCTTGAGCATATTGCATGGTCCTACAGCTCCTCCATTCAATCATATGAAGCATTTGGAGATGCTGTGGTTTTTGATACAACCTACCGAGTAGATGCTTATGACATGCTGTTGGGAATTTGGCTTGGTGTGGACAATAATGGGATGACTTGCTTCTTTAGTTGTGCACTTCTGCGGGATGAAAACATGCAGCAAGAACCTTATGATATTGCTTTCTTGAGCTTCATGAAAGGAAAGGCTCCACAAACAATATTAACAGATCATAACATGTGGCTGAAAGAAGCTATTGCTGTTGAATTGCCTGAAACTAAACATGCCTTTTGTATATGGCATATTCTTTCTAAGTTCTCTGACTGGTTTTCTTTACTTCTTGGATCACAATATGATGAGTGGAAAGCTGAGTTCCATCGGCTCTACAATTTGGAATTGGTGGATGATTTTGAAGAAGGCTGGAGGCAAATGGTTGATAAATATGGACTCCACACAAATAAACATATTATTAGCCTATATTCATTAAGGACGTTTTGGGCTTTACCATTCTTGAGGTGTTCCTTCTTTGCTGGATTGACCAGTACATGTCAGTCTGAGTCCATTAATGCTTTCATCCAACGATTCTTGAGTGCTCAATCTCAACTAGATCATTTTGTGGAGCAAGTGGCTGATATTGTTGATTTTAATGATCGAGCTGGAGCAAAGCAAAAGATGCAAAGGAAAATGCAGAAAGTGTGCCTCAAAACAGGTTCACCTATTGAATCCCATGCGGCCACTATACTTACTCCTTATGCCTTAAGTAAACTCCAAGAAGAGCTAGTTTTGGCGCCACAATATGCATCCTTTATGGTGGGTGAAGATTGTTTCCAGGTCAGATACCACTCTCAGTCAGATGGAGGATGCAAAGTATTTTGGGTTCCTTGTCAAGAGCACATCAGCTGCAGCTGCCAACTGTTTGAGTTTTCAGGCATCTTATGTAGACACGTGCTACGTGTCATGTCTACTAATAACTGCTTTCACATCCCTGATCAATATTTACCAGCTCGTTGGCGAGGCATCAGTTCATCTTCTGTTAACCACTTTCGGGGTACAAATTGTAGAGATCAGCCTGAAAGGATACAATTTTTGGAATCCATGGCTTCATCATTTTTAGTGGAATCCATTGAAACCGAGGAACGGCTAGATGTTGCTTGCGAGCAAATTTCCATGGTGCTATCACGTATCAAAACCCTTCCTAGGTCCACACATGGGGTGAATGACATTGCATATAGTTATCCATCAGATTCATTGATCCTGCCAGAGGTAGAAGATACTGATGGAATGATTCACGGCTTTGCAATCACAAATCCCCATGATTCTATCACTACAGGAAAGCTGAAGGAGAGAAGAGCAAGAGATGGAGTCGATCTCACTAGGAAGCGCAGGCAGTTCTCGGGGCCATTGTGTGCTCAATATGGACATGATGCATCTGATTGCTCAATAATGGCGGGTGACAATATGAGTGGAGATGCATTAGGATGCATGTTGTAA 2277 0.4185 MSEGTSLVLESSENGTDLSQDDIGTIEETPEETILSRQTSVNLVPFIGQRFVSQEAAYEFYCSFAKQCGFSIRRHRTRGKDGVGRGVTRRDFTCHRGGYPQIKPSDDAKVQRNRKSSRCGCQAYMRIVKRADFDVPEWRVTGFRNIHNHELLKSNEVRLLPAYCPISPDDKSRICMFAKAGMSVRQMLRLMELEKGIKLGCLPFTEIDVRNLLQSFRNVDRDNDAIDLIAMCKRLKDENHDFKYEFKIDNNNRLEHIAWSYSSSIQSYEAFGDAVVFDTTYRVDAYDMLLGIWLGVDNNGMTCFFSCALLRDENMQQEPYDIAFLSFMKGKAPQTILTDHNMWLKEAIAVELPETKHAFCIWHILSKFSDWFSLLLGSQYDEWKAEFHRLYNLELVDDFEEGWRQMVDKYGLHTNKHIISLYSLRTFWALPFLRCSFFAGLTSTCQSESINAFIQRFLSAQSQLDHFVEQVADIVDFNDRAGAKQKMQRKMQKVCLKTGSPIESHAATILTPYALSKLQEELVLAPQYASFMVGEDCFQVRYHSQSDGGCKVFWVPCQEHISCSCQLFEFSGILCRHVLRVMSTNNCFHIPDQYLPARWRGISSSSVNHFRGTNCRDQPERIQFLESMASSFLVESIETEERLDVACEQISMVLSRIKTLPRSTHGVNDIAYSYPSDSLILPEVEDTDGMIHGFAITNPHDSITTGKLKERRARDGVDLTRKRRQFSGPLCAQYGHDASDCSIMAGDNMSGDALGCML 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17333g00001 758 ProSiteProfiles Zinc finger SWIM-type profile. 538 586 IPR007527 GO:0008270
Mupr17333g00001 758 Pfam MULE transposase domain 275 366 IPR018289 -
Mupr17333g00001 758 MobiDBLite consensus disorder prediction 1 23 - -
Mupr17333g00001 758 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 39 617 IPR031052 GO:0006355
Mupr17333g00001 758 Pfam FAR1 DNA-binding domain 59 152 IPR004330 -
Mupr17333g00001 758 SMART 26again6 561 588 IPR006564 GO:0008270
Mupr17333g00001 758 Pfam SWIM zinc finger 558 583 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17333g00001 Mupr-Chr17333 6699 9740 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mupr17333g00001 FAR1 6.1e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17333g00001 - - gmx:100778434 1433.7