Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17330g00002 ATGAATATCTTCCTCGTCCCTGTCTTATTGGTTTGTGAGATGTCGGATGCGCCAACGAGCCCGAGTCACGAGAGTGGGGGCGAGCAGAGTCCGCGCGGTTCGTCGTCCGGTGCGAGGGAGCAGGACCGTTACCTTCCCATTGCCAACATCAGCCGCATCATGAAGAAGGCCTTGCCTCCTAATGGAAAGATTGCGAAGGACGCCAAAGACACCATGCAGGAATGCGTTTCTGAATTCATTAGCTTCATTACCAGCGAGGCTAGTGAGAAATGCCAGAAAGAGAAGAGAAAGACAATTAATGGAGACGATTTGCTATGGGCCATGGCTACTTTAGGATTTGAAGACTACATAGAGCCGCTTAAGGTGTACCTGGGAAGGTACAGAGAGGGTGACACTAAAGGATCTGCTAGAAGTGGTGATGGATCTGCTAGACCAGATCAAGTTGGCCTTGCAGGTCAAAATGCTCAGCTTGTTCATCAAGGTTCGCTGAACTATATTAGTTTGCAGGTGCAACCGCAACATCTGGTTATGCCTTCAATGCAAACCCATGAGTAG 555 0.4937 MNIFLVPVLLVCEMSDAPTSPSHESGGEQSPRGSSSGAREQDRYLPIANISRIMKKALPPNGKIAKDAKDTMQECVSEFISFITSEASEKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLGRYREGDTKGSARSGDGSARPDQVGLAGQNAQLVHQGSLNYISLQVQPQHLVMPSMQTHE 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17330g00002 184 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 27 149 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mupr17330g00002 184 FunFam Nuclear factor Y, subunit B1 34 133 - -
Mupr17330g00002 184 PRINTS CCAAT-binding transcription factor subunit A signature 91 109 - -
Mupr17330g00002 184 PRINTS CCAAT-binding transcription factor subunit A signature 72 90 - -
Mupr17330g00002 184 PRINTS CCAAT-binding transcription factor subunit A signature 110 128 - -
Mupr17330g00002 184 MobiDBLite consensus disorder prediction 18 37 - -
Mupr17330g00002 184 MobiDBLite consensus disorder prediction 17 41 - -
Mupr17330g00002 184 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 44 108 IPR003958 -
Mupr17330g00002 184 SUPERFAMILY Histone-fold 41 139 IPR009072 GO:0046982
Mupr17330g00002 184 Gene3D Histone, subunit A 31 163 IPR009072 GO:0046982
Mupr17330g00002 184 ProSitePatterns NF-YB/HAP3 subunit signature. 75 91 IPR003956 GO:0005634|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17330g00002 Mupr-Chr17330 13104 18339 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17330g00002 22 178 CCAAT-HAP3 Transcription Factor Family AT2G37060 71.875 1.66e-74 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mupr17330g00002 CBFD_NFYB_HMF 9.9e-29 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17330g00002 K08065 - gmx:100779577 328.176