Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17322g00001 ATGAGGAAACCTGATCTGATGGCCAACAACAACAAGGACAAAATGAACAGCATTAGGAGCAAGTTGAGGAAAGGGTTGTGGTCACCTGATGAAGATGAGAAGCTCATGAGGTACATGCTCACAAATGGACAAGGGTGTTGGAGTGACATTGCTAGGAATGCTGGCCTTCAAAGGTGTGGCAAAAGTTGCCGTCTTCGTTGGATTAACTACTTGAGACCTGACCTCAAACGTGGTGCATTCTCACCCCAAGAGGAAGATCTCATCATTCATTTGCATTCCATTCTTGGCAATAGGTGGTCTCAGATTGCAGCACGCCTCCCTGGCCGCACAGACAATGAGATAAAGAATTTCTGGAACTCCACATTGAAGAAAAGGTTGAAAACTAACACTTCCACTCCATCACAAAACAACAGCACTGACTCATCAGAGTCTAAAGATGTTTTGAGTGGGATGATGCCCTTTAATGAGCATGACATGATGACCATGTGCATGGATTCCTCTTCATCAATATCATCCATGCAAGCCATGGTTTTGCCTGACCAATTTGACCCCTTTTCCATGCTGGTAAACAATCAGTGTGACATGACTAATGTTTCAGCTGATTTTCCCAACATGCCTGCATCATGCTTGACCCAACTTGGCATGGTAGAGGGGCATCAAGGGAATTATGGGATATTGGAGCCAAATAAAATGGGGTTAGGAAGAGACTTCTCCCTTCCTTCACTAGAAAGTACAAGCATTGAAAGCAATAGTGTCCAAATTGATGTGAAAAGCCATAACAACCACTTCAATTATGGTTCCTTCAATAACACTGATAAGATTCAGGGCTCCAAAGTAGAGGACTTAATTGGGTTTGGAAATCATGGCCAAGGGGAAAATTTAAAAATGGGAGAGTGGGATTTGGAGAATTTGATGCAAGACATAACCTCTTTTCCTTTCCTTGATTTTTAA 951 0.4269 MRKPDLMANNNKDKMNSIRSKLRKGLWSPDEDEKLMRYMLTNGQGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEDLIIHLHSILGNRWSQIAARLPGRTDNEIKNFWNSTLKKRLKTNTSTPSQNNSTDSSESKDVLSGMMPFNEHDMMTMCMDSSSSISSMQAMVLPDQFDPFSMLVNNQCDMTNVSADFPNMPASCLTQLGMVEGHQGNYGILEPNKMGLGRDFSLPSLESTSIESNSVQIDVKSHNNHFNYGSFNNTDKIQGSKVEDLIGFGNHGQGENLKMGEWDLENLMQDITSFPFLDF 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17322g00001 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 126 IPR017930 -
Mupr17322g00001 316 FunFam MYB transcription factor 21 77 - -
Mupr17322g00001 316 SUPERFAMILY Homeodomain-like 22 118 IPR009057 -
Mupr17322g00001 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 71 IPR017930 -
Mupr17322g00001 316 ProSiteProfiles Myb-like domain profile. 72 122 IPR001005 -
Mupr17322g00001 316 MobiDBLite consensus disorder prediction 125 147 - -
Mupr17322g00001 316 CDD SANT 79 122 IPR001005 -
Mupr17322g00001 316 PANTHER MYB DOMAIN PROTEIN 55 19 263 - -
Mupr17322g00001 316 FunFam Transcription factor MYB46 78 147 - -
Mupr17322g00001 316 SMART sant 23 73 IPR001005 -
Mupr17322g00001 316 SMART sant 76 124 IPR001005 -
Mupr17322g00001 316 Gene3D - 78 148 - -
Mupr17322g00001 316 ProSiteProfiles Myb-like domain profile. 19 71 IPR001005 -
Mupr17322g00001 316 Gene3D - 21 77 - -
Mupr17322g00001 316 Pfam Myb-like DNA-binding domain 77 121 IPR001005 -
Mupr17322g00001 316 Pfam Myb-like DNA-binding domain 24 71 IPR001005 -
Mupr17322g00001 316 CDD SANT 27 71 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17322g00001 Mupr-Chr17322 7669 9430 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17322g00001 1 316 MYB Transcription Factor Family AT3G08500 47.740 2.28e-83 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr17322g00001 Myb_DNA-binding 4.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17322g00001 K09422 - gmx:100784755 580.096