Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17317g00001 ATGAAGCCCAATATTTGGAGTCACTTTGAGCCCAGCCCAGACTTTAAGAAAACCCTAGCGTGCTTTTTCCAGAACCCGGCAACTAAGACTAATGGTGGCTCTGTAATAGTATTTTGCGTTCAATCAGAGTATCCGATACTCTGCCTCCTTCCTTCGCATATTATTTCAACTTGCTTTTTGTTGCAAGGAAACGTCAAGATGGTGAAGTTTACAGCTGAAGAGCTTCGTCGCATTATGGACTTCAAGCACAACATCCGTAATATGTCTGTTATTGCACATGTTGATCATGGAAAATCAACCCTTACGGATTCTCTAGTGGCTGCTGCTGGTATTATTGCACAAGAAGTTGCAGGAGATGTTCGGATGACAGATACCCGCCAGGATGAAGCTGAGCGTGGCATCACAATCAAGTCTACTGGTATCTCTCTCTACTATGAAATGTCTGATGAATCTCTCAAGAACTACAAGGGAGAACGCAATGGGAATGAGTACCTCATCAACCTTATTGACTCTCCTGGGCACGTGGACTTCTCTTCTGAGGTTACAGCTGCCCTGCGCATTACTGATGGGGCCCTTGTGGTGGTGGATTGTGTTGAGGGTGTCTGTGTTCAAACTGAAACAGTTCTCCGTCAGGCTCTTGGTGAAAGGATCCGACCTGTTTTGACTGTTAACAAGATGGATAGGTGTTTCCTTGAGCTTCAGGTGGATGGAGAAGAAGCTTACCAGACATTTCAGAGAGTTATTGAGAATGCTAATGTGATTATGGCTACATATGAAGATCCCCTTCTTGGTGATGTTCAGGTCTACCCAGAGAAAGGAACTGTTGCCTTTTCTGCTGGTTTGCATGGCTGGGCTTTCACTCTGACCAACTTTGCTAAAATGTATGCCTCAAAGTTTGGAGTTGATGAGGCAAAGATGATGGAAAGGCTCTGGGGTGAGAGTTTCTTTGATCCAGCCACCAAGAAATGGACCGGCAAGAATACTGGTTCTCCTACATGCAAGCGTGGTTTTGTTCAGTTTTGTTATGAGCCTATCAAACAGATAATTTCAACTTGTATGAATGATCAGAAGGATAAGCTGTGGCCTATGTTACAAAAACTTGGAATCACCATGAAATCTGATGAGAAAGACCTGATGGGTAAAGCTCTAATGAAACGTGTCATGCAGACCTGGCTCCCAGCAAGTACTGCACTTTTGGAGATGATGATATTCCATCTTCCCTCTCCTTCAAGGGCCCAAAAGTATCGTGTAGAGAACTTGTACGAGGGTCCCCTTGATGATGCTTATGCAAATGCTATTAGGAACTGTGATCCTGATGGACCTTTAATGCTTTATGTTTCAAAGATGATTCCTGCATCTGATAAGGGTAGGTTTTTTGCTTTTGGCCGTGTTTTCTCTGGTAAGGTCTCAACTGGTTTGAAAGTCAGGATTATGGGTCCAAATTATGTCCCTGGAGAGAAGAAAGACTTGTATGTCAAGAGTGTGCAAAGGACTGTTATTTGGATGGGGAAAAGGCAAGAAACTGTTGAGGATGTGCCTTGTGGTAACACTGTTGCCATGGTTGGATTGGACCAATTTATCACCAAGAATGCAACATTAACTAATGAAAAGGAAGTTGATGCACACCCTATTCGAGCTATGAAGTTTTCTGTGTCACCCGTTGTTCGTGTTGCTGTCCAGTGCAAGGTTGCATCGGATCTTCCTAAGCTTGTTGAAGGTCTTAAACGATTGGCCAAATCTGATCCTATGGTTGTGTGTACTATGGAGGAGTCTGGAGAGCACATTGTTGCTGGTGCTGGAGAACTCCACCTTGAGATCTGCTTGAAGGACTTGCAGGACGATTTCATGGGTGGAGCCGAGATTATTAAGTCAGATCCTGTTGTGTCCTTCCGTGAGACTGTCTTAGAGAGATCTTGCCGCACTGTGATGAGCAAGTCACCCAACAAGCACAACCGTCTGTACATGGAAGCCAGACCCTTGGAGGAGGGGCTTCCAGAGGCTATTGATGACGGTCGTATTGGTCCAAGGGATGACCCTAAAGTTCGTTCTAAAATTTTGTCTGAAGAATTTGGTTGGGATAAGGATCTTGCAAAGAAAATCTGGTGTTTTGGACCGGAGACAATGGGACCTAATATGGTGGTTGATATGTGTAAGGGTGTCCAATACCTGAATGAAATTAAAGACTCTGTTGTTGCTGGGTTCCAGTGGGCATCAAAAGAAGGTGCATTGGCTGAAGAAAACATGAGGGCCATCTGCTTTGAAGTCTGTGATGTTGTTCTCCATACTGATGCTATCCACAGAGGTGGTGGTCAGATCATTCCCACTGCTAGGAGAGTCTTCTATGCTTCCCAGTTAACTGCAAAGCCTAGGCTTCTTGAGCCTGTATACCTCGTTGAAATACAGGCACCTGAGCAGGCTCTTGGTGGCATCTACAGTGTTCTTAACCAGAAACGTGGTCATGTCTTTGAGGAAATGCAGCGTCCCGGTACCCCATTATACAACATCAAGGCATACCTCCCTGTCGTGGAGTCCTTCGGTTTCTCAAGCACATTGAGGGCTGCAACATCAGGGCAGGCTTTCCCTCAGTGTGTTTTTGATCACTGGGATATGATGTCTTCCGATCCTTTGGAGCCTGGTACTCAAGCTGCACAGCTTGTTACTGACATTCGTAAGAGGAAAGGTTTGAAGGAGCAGATGACACCGCTTTCCGAATTTGAGGACAGGCTTTAA 2730 0.4513 MKPNIWSHFEPSPDFKKTLACFFQNPATKTNGGSVIVFCVQSEYPILCLLPSHIISTCFLLQGNVKMVKFTAEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMSDESLKNYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDEAKMMERLWGESFFDPATKKWTGKNTGSPTCKRGFVQFCYEPIKQIISTCMNDQKDKLWPMLQKLGITMKSDEKDLMGKALMKRVMQTWLPASTALLEMMIFHLPSPSRAQKYRVENLYEGPLDDAYANAIRNCDPDGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKRQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTMEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLERSCRTVMSKSPNKHNRLYMEARPLEEGLPEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETMGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRAICFEVCDVVLHTDAIHRGGGQIIPTARRVFYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVTDIRKRKGLKEQMTPLSEFEDRL 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17317g00001 909 FunFam Translation elongation factor 2 552 629 - -
Mupr17317g00001 909 FunFam Translation elongation factor 2 69 303 - -
Mupr17317g00001 909 Gene3D - 69 303 IPR027417 -
Mupr17317g00001 909 SUPERFAMILY EF-G C-terminal domain-like 550 626 IPR035647 -
Mupr17317g00001 909 SUPERFAMILY Ribosomal protein S5 domain 2-like 628 792 IPR020568 -
Mupr17317g00001 909 Pfam Elongation factor G C-terminus 790 876 IPR000640 -
Mupr17317g00001 909 SUPERFAMILY EF-G C-terminal domain-like 793 904 IPR035647 -
Mupr17317g00001 909 CDD aeEF2_snRNP_like_IV 625 797 - -
Mupr17317g00001 909 FunFam Translation elongation factor 2 789 909 - -
Mupr17317g00001 909 Pfam Elongation Factor G, domain III 553 615 IPR041095 -
Mupr17317g00001 909 CDD EF2 86 296 - -
Mupr17317g00001 909 Gene3D Elongation Factor G (Translational Gtpase), domain 3 552 629 - -
Mupr17317g00001 909 CDD EF2_snRNP_III 553 625 - -
Mupr17317g00001 909 PRINTS GTP-binding elongation factor signature 87 100 IPR000795 GO:0003924|GO:0005525
Mupr17317g00001 909 PRINTS GTP-binding elongation factor signature 131 139 IPR000795 GO:0003924|GO:0005525
Mupr17317g00001 909 PRINTS GTP-binding elongation factor signature 219 228 IPR000795 GO:0003924|GO:0005525
Mupr17317g00001 909 PRINTS GTP-binding elongation factor signature 183 194 IPR000795 GO:0003924|GO:0005525
Mupr17317g00001 909 PRINTS GTP-binding elongation factor signature 167 177 IPR000795 GO:0003924|GO:0005525
Mupr17317g00001 909 Gene3D Translation factors 409 550 - -
Mupr17317g00001 909 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 407 IPR027417 -
Mupr17317g00001 909 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 83 410 IPR000795 GO:0003924|GO:0005525
Mupr17317g00001 909 FunFam Translation elongation factor 2 635 788 - -
Mupr17317g00001 909 Pfam Elongation factor Tu GTP binding domain 83 408 IPR000795 GO:0003924|GO:0005525
Mupr17317g00001 909 SMART EFG_C_a 790 879 IPR000640 -
Mupr17317g00001 909 FunFam Translation elongation factor 2 409 550 - -
Mupr17317g00001 909 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 124 139 IPR031157 -
Mupr17317g00001 909 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 74 907 - -
Mupr17317g00001 909 SUPERFAMILY Translation proteins 409 542 IPR009000 -
Mupr17317g00001 909 Gene3D - 636 788 IPR014721 -
Mupr17317g00001 909 NCBIfam small GTP-binding protein domain 86 242 IPR005225 GO:0005525
Mupr17317g00001 909 Gene3D - 789 909 - -
Mupr17317g00001 909 CDD eEF2_snRNP_like_C 793 871 - -
Mupr17317g00001 909 CDD EF2_II 441 536 - -
Mupr17317g00001 909 SMART EFG_IV_2 672 788 IPR005517 GO:0005525
Mupr17317g00001 909 Pfam Elongation factor Tu domain 2 460 533 IPR004161 GO:0005525
Mupr17317g00001 909 Pfam Elongation factor G, domain IV 677 788 IPR005517 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17317g00001 Mupr-Chr17317 5676 9505 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17317g00001 67 909 Eukaryotic Initiation Factors Gene Family AT1G56070 93.357 0.0 1660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17317g00001 K03234 - tcc:18594569 1649.8